Fiche participant :
Nom : Puillandre
Prénom : Nicolas
Liste des participations aux campagnes accessibles [+] [-]
- ATIMO VATAE
- Nosy Be 11 (Thu Apr 29 00:00:00 CEST 2010 - Sat May 15 00:00:00 CEST 2010)
- Tue Apr 27 00:00:00 CEST 2010 - Fri May 07 00:00:00 CEST 2010 Collecte - Tri (Malacologie, Muséum national d'Histoire naturelle)
- AURORA 2007
- (Sun May 20 00:00:00 CEST 2007 - Tue Jun 05 00:00:00 CEST 2007)
- ( Muséum national d'Histoire naturelle)
- CORSICABENTHOS 1
- CAMPAGNE (Mon May 06 00:00:00 CEST 2019 - Fri May 24 00:00:00 CEST 2019)
- Barcoding moléculaire (Malacologie, Muséum national d'Histoire naturelle)
- KANACONO
- Leg 1 (Tue Aug 09 00:00:00 CEST 2016 - Sun Aug 21 00:00:00 CEST 2016)
- Chef de mission (Systématique moléculaire des mollusques, Muséum national d'Histoire naturelle)
- Leg 2 (Mon Aug 22 00:00:00 CEST 2016 - Tue Aug 30 00:00:00 CEST 2016)
- Chef de mission (Systématique moléculaire des mollusques, Muséum national d'Histoire naturelle)
- KANADEEP 2
- Leg.2 (Sun Sep 22 00:00:00 CEST 2019 - Tue Oct 01 00:00:00 CEST 2019)
- Tri et identification des mollusques (Biologie, Muséum national d'Histoire naturelle)
- KARUBENTHOS 2012
- Première partie (Wed May 02 00:00:00 CEST 2012 - Mon May 28 00:00:00 CEST 2012)
- Barcode mollusques (Systématique moléculaire, Muséum national d'Histoire naturelle)
- MIRIKY
- Leg 1 (Thu Jun 25 00:00:00 CEST 2009 - Fri Jul 03 00:00:00 CEST 2009)
- Barcode mollusques (Systématique moléculaire des mollusques, Muséum national d'Histoire naturelle)
- PAPUA NIUGINI
- Shore-based sampling (Mon Nov 05 00:00:00 CET 2012 - Fri Dec 14 00:00:00 CET 2012)
- ( Muséum national d'Histoire naturelle)
Contributions taxonomiques [+] [-]
Etat doc | Rang contributeur | Date détermination | Classe | Ordre | Famille | Genre | Espèce | Libellé taxonomique |
---|---|---|---|---|---|---|---|---|
a | Tue Apr 09 00:00:00 CEST 2013 | Gastropoda | Littorinimorpha | Strombidae | Gen. | sp. | ||
a | Tue Apr 09 00:00:00 CEST 2013 | Gastropoda | Littorinimorpha | Strombidae | Lobatus | gigas | ||
a | Tue Apr 09 00:00:00 CEST 2013 | Gastropoda | Neogastropoda | Muricidae | Gen. | sp. | ||
a | Tue Apr 09 00:00:00 CEST 2013 | Gastropoda | Neogastropoda | Muricidae | Gen. | sp. | ||
a | Tue Apr 09 00:00:00 CEST 2013 | Gastropoda | Neogastropoda | Muricidae | Gen. | sp. | ||
a | Gastropoda | Neogastropoda | Muricidae | Murex | sp. | |||
a | Gastropoda | Neogastropoda | Turridae |
Bibliographie (75) [+] [-]
Exporter les bibliographies
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Abdelkrim J., Aznar-cormano L., Buge B., Fedosov A., Kantor Y., Zaharias P. & Puillandre N. 2018. Delimiting species of marine gastropods (Turridae, Conoidea) using RAD sequencing in an integrative taxonomy framework. Molecular Ecology 27(22): 4591-4611. DOI:10.1111/mec.14882
Résumé [+] [-]Species delimitation in poorly known and diverse taxa is usually performed based on monolocus, DNA-barcoding-like approaches, while multilocus data are often used to test alternative species hypotheses in well-studied groups. We combined both approaches to delimit species in the Xenuroturris/Iotyrris complex, a group of venomous marine gastropods from the Indo-P acific. First, COI sequences were analysed using three methods of species delimitation to propose primary species hypotheses. Second, RAD sequencing data were also obtained and a maximum-likelihood phylogenetic tree produced. We tested the impact of the level of missing data on the robustness of the phylogenetic tree obtained with the RAD-seq data. Alternative species partitions revealed with the COI data set were also tested using the RAD-seq data and the Bayes factor species delimitation method. The congruence between the species hypotheses proposed with the mitochondrial nuclear data sets, together with the morphological variability of the shell and the radula and the distribution pattern, was used to turn the primary species hypotheses into secondary species hypotheses. Allopatric primary species hypotheses defined with the COI gene were interpreted to correspond to intraspecific structure. Most of the species are found sympatrically in the Philippines, and only one is confidently identified as a new species and described as Iotyrris conotaxis n. sp. The results obtained demonstrate the efficiency of the combined monolocus/multilocus approach to delimit species.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Abdelkrim J., Aznar-cormano L., Fedosov A.E., Kantor Y.I., Lozouet P., Phuong M.A., Zaharias P. & Puillandre N. 2018. Exon-Capture-Based Phylogeny and Diversification of the Venomous Gastropods (Neogastropoda, Conoidea), in Vidal N.(Ed.), Molecular Biology and Evolution 35(10): 2355-2374. DOI:10.1093/molbev/msy144
Résumé [+] [-]Transcriptome-based exon capture methods provide an approach to recover several hundred markers from genomic DNA, allowing for robust phylogenetic estimation at deep timescales. We applied this method to a highly diverse group of venomous marine snails, Conoidea, for which published phylogenetic trees remain mostly unresolved for the deeper nodes. We targeted 850 protein coding genes (678,322 bp) in ca. 120 samples, spanning all (except one) known families of Conoidea and a broad selection of non-Conoidea neogastropods. The capture was successful for most samples, although capture efficiency decreased when DNA libraries were of insufficient quality and/or quantity (dried samples or low starting DNA concentration) and when targeting the most divergent lineages. An average of 75.4% of proteins was recovered, and the resulting tree, reconstructed using both supermatrix (IQ-tree) and supertree (Astral-II, combined with the Weighted Statistical Binning method) approaches, are almost fully supported. A reconstructed fossil-calibrated tree dates the origin of Conoidea to the Lower Cretaceous. We provide descriptions for two new families. The phylogeny revealed in this study provides a robust framework to reinterpret changes in Conoidea anatomy through time. Finally, we used the phylogeny to test the impact of the venom gland and radular type on diversification rates. Our analyses revealed that repeated losses of the venom gland had no effect on diversification rates, while families with a breadth of radula types showed increases in diversification rates, thus suggesting that trophic ecology may have an impact on the evolution of Conoidea.
Campagnes accessibles citées (23) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CEAMARC-AA, CONCALIS, Restreint, DongSha 2014, EXBODI, GUYANE 2014, ILES DU SALUT, INHACA 2011, KARUBENTHOS 2012, KAVIENG 2014, MAINBAZA, NORFOLK 2, NanHai 2014, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMONBOA 3, TAIWAN 2013, TERRASSES, Restreint
Codes des collections associés: IM (Mollusques) -
Anseeuw P., Puillandre N., Utge J. & Bouchet P. 2015. Perotrochus caledonicus (Gastropoda: Pleurotomariidae) revisited: descriptions of new species from the South-West Pacific. European Journal of Taxonomy 134: 1-23. DOI:10.5852/ejt.2015.134
Campagnes accessibles citées (15) [+] [-]BATHUS 3, BATHUS 4, CONCALIS, EBISCO, LITHIST, MUSORSTOM 4, MUSORSTOM 5, MUSORSTOM 6, NORFOLK 1, NORFOLK 2, SMIB 5, SMIB 6, SMIB 8, TERRASSES, VOLSMAR
Codes des collections associés: IM (Mollusques) -
Aznar-cormano L., Brisset J., Chan T., Corbari L., Puillandre N., Utgé J., Zbinden M., Zuccon D. & Samadi S. 2015. An improved taxonomic sampling is a necessary but not sufficient condition for resolving inter-families relationships in Caridean decapods. Genetica 143(2): 195-205. DOI:10.1007/s10709-014-9807-0
Résumé [+] [-]During the past decade, a large number of multi-gene analyses aimed at resolving the phylogeneticrelationships within Decapoda. However relationships among families, and even among sub-families, remain poorly defined. Most analyses used an incomplete and opportunistic sampling of species, but also an incomplete and opportunistic gene selection among those available for Decapoda. Here we test in the Caridea if improving the taxonomic coverage following the hierarchical scheme of the classification, as it is currently accepted, provides a better phylogenetic resolution for the inter-families relationships. The rich collections of the Muse´um National d’Histoire Naturelle de Paris are used for sampling as far as possible at least two species of two different genera for each family or subfamily. All potential markers are tested over this sampling. For some coding genes the amplification success varies greatly among taxa and the phylogenetic signal is highly saturated. This result probably explains the taxon-heterogeneity among previously published studies. The analysis is thus restricted to the genes homogeneously amplified over the whole sampling. Thanks to the taxonomic sampling scheme the monophyly of most families is confirmed. However the genes commonly used in Decapoda appear non-adapted for clarifying inter-families relationships, which remain poorly resolved. Genome-wide analyses, like transcriptome-based exon capture facilitated by the new generation sequencing methods might provide a sounder approach to resolve deep and rapid radiations like the Caridea.
Campagnes accessibles citées (39) [+] [-]Restreint, ATIMO VATAE, Restreint, Restreint, BATHUS 1, BATHUS 3, BATHUS 4, BENTHAUS, BERYX 11, BERYX 2, BIOCAL, Restreint, BIOPAPUA, Restreint, Restreint, Restreint, Restreint, Restreint, Restreint, HALIPRO 1, HALIPRO 2, Restreint, KARUBAR, Restreint, LAGON, MAINBAZA, MD08 (BENTHOS), MD20 (SAFARI), MIRIKY, MUSORSTOM 2, MUSORSTOM 3, MUSORSTOM 5, MUSORSTOM 9, NORFOLK 1, NORFOLK 2, SALOMON 2, SALOMONBOA 3, SANTO 2006, SMCB
Codes des collections associés: IU (Crustacés) -
Bail P. & Puillandre N. 2012. A new species of Fusivoluta Martens, 1902 (Gastropoda: Volutidae) from Mozambique. The Nautilus 126(4): 127-135
Résumé [+] [-]During a recent expedition to Mozambique, several specimens attributed to the genus Fusivoluta von Martens, 1902 were collected between 1100 and 1820 m deep. Among them, a new species has been found and is here described and compared with the other East African Fusivoluta. Several livecollected specimens, belonging to the newly described species and to Fusivoluta clarkei Rehder, 1969 were sequenced for a nuclear gene (28S), revealing fixed differences between the two species.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Bouchet P., Kantor Y.I., Sysoev A.V. & Puillandre N. 2011. A new operational classification of the Conoidea (Gastropoda). Journal of Molluscan Studies 77(3): 273-308. DOI:10.1093/mollus/eyr017
Résumé [+] [-]A new genus-level classification of the Conoidea is presented, based on the molecular phylogeny of Puillandre et al. in the accompanying paper. Fifteen lineages are recognized and ranked as families to facilitate continuity in the treatment of the names Conidae (for 'cones') and Terebridae in their traditional usage. The hitherto polyphyletic 'Turridae' is now resolved as 13 monophyletic families, in which the 358 currently recognized genera and subgenera are placed, or tentatively allocated: Conorbidae (2 (sub) genera), Borsoniidae (34), Clathurellidae (21), Mitromorphidae (8), Mangeliidae (60), Raphitomidae (71), Cochlespiridae (9), Drilliidae (34), Pseudomelatomidae (=Crassispiridae) (59), Clavatulidae (14), Horaiclavidae new family (28), Turridae s. s. (16) and Strictispiridae (2). A diagnosis with description of the shell and radulae is provided for each of these families.
Campagnes accessibles citées (26) [+] [-]AURORA 2007, BATHUS 1, BATHUS 2, BATHUS 4, BIOCAL, BOA1, BORDAU 1, BORDAU 2, CONCALIS, EBISCO, Restreint, LIFOU 2000, MONTROUZIER, MUSORSTOM 10, MUSORSTOM 4, MUSORSTOM 6, MUSORSTOM 7, MUSORSTOM 8, NORFOLK 1, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SANTO 2006, SMIB 8, VAUBAN 1978-1979
Codes des collections associés: IM (Mollusques) -
Castelin M., Puillandre N., Lozouet P., Sysoev A., Richer de forges B. & Samadi S. 2011. Molluskan species richness and endemism on New Caledonian seamounts: Are they enhanced compared to adjacent slopes?. Deep Sea Research Part I: Oceanographic Research Papers 58(6): 637-646. DOI:10.1016/j.dsr.2011.03.008
Résumé [+] [-]Seamounts were often considered as‘hotspots of diversity’ and ‘centers of endemism’,but recently this opinion has been challenged. After 25 years of exploration and the work of numerous taxonomists, the Norfolk Ridge (Southwest Pacific) is probably one of the best-studied seamount chains worldwide. However,even in this intensively explored area, the richness and the geographic patterns of diversity are still poorly characterized. Among the benthic organisms,the post-mortem remains of mollusks can supplement live records to comprehensively document geographical distrbutions. Moreover, the accretionary growth of mollusk shells informs us about the lifes pan of the pelagic larva.To compare diversity and level of endemism between the Norfolk Ridge seamounts and the continental slopes of New Caledonia we used species occurrence data drawn from (i) the taxonomic literature on mollusks and (ii) a raw dataset of mainly undescribed deep-sea species of the hyperdiverse Turridae. Patterns of endemism and species richness were analyzed through quantitative indices of endemism and species richness estimates or metrics.To date, 403 gastropods and bivalves species have been recorded on the Norfolk Ridge seamounts. Of these, at least 38 species(10%) are potentially endemic to the seamounts and nearly all of 38 species have protoconchs indicating lecithotrophic larval development. Overall, our results suggest that estimates of species richness and endemism ,when sampling effort is taken into account, were not significantly different between slopes and seamounts. By including in our analyses 347 undescribed morphospecies from the Norfolk Ridge, our results also demonstratet he influence of taxonomic bias on our estimates of species richness and endemism.
Campagnes accessibles citées (16) [+] [-]AZTEQUE, BATHUS 2, BATHUS 3, BERYX 11, BIOCAL, CHALCAL 2, HALIPRO 2, LITHIST, NORFOLK 1, NORFOLK 2, SMIB 10, SMIB 3, SMIB 4, SMIB 5, SMIB 8, TERRASSES
Codes des collections associés: IM (Mollusques) -
Castelin M., Puillandre N., Kantor Y., Modica M.V., Terryn Y., Cruaud C., Bouchet P. & Holford M. 2012. Macroevolution of venom apparatus innovations in auger snails (Gastropoda; Conoidea; Terebridae). Molecular Phylogenetics and Evolution 64(1): 21-44. DOI:10.1016/j.ympev.2012.03.001
Résumé [+] [-]The Terebridae are a diverse family of tropical and subtropical marine, gastropods that use a complex and modular venom apparatus to produce toxins that capture polychaete and enteropneust preys. The complexity of the terebrid venom apparatus suggests that venom apparatus development in the Terebridae could be linked to the diversification of the group and can be analyzed within a molecular phylogenetic scaffold to better understand terebrid evolution. Presented here is a molecular phylogeny of 89 terebrid species belonging to 12 of the 15 currently accepted genera, based on Bayesian inference and Maximum Likelihood analyses of amplicons of 3 mitochondrial (COI, 165 and 12S) and one nuclear (28S) genes. The evolution of the anatomy of the terebrid venom apparatus was assessed by mapping traits of six related characters: proboscis, venom gland, odontophore, accessory proboscis structure, radula, and salivary glands. A novel result concerning terebrid phylogeny was the discovery of a previously unrecognized lineage, which includes species of Euterebra and Duplicaria. The non-monophyly of most terebrid genera analyzed indicates that the current genus-level classification of the group is plagued with homoplasy and requires further taxonomic investigations. Foregut anatomy in the family Terebridae reveals an inordinate diversity of features that covers the range of variability within the entire superfamily Conoidea, and that hypodermic radulae have likely evolved independently on at least three occasions. These findings illustrate that terebrid venom apparatus evolution is not perfunctory, and involves independent and numerous changes of central features in the foregut anatomy. The multiple emergence of hypodermic marginal radular teeth in terebrids are presumably associated with variable functionalities, suggesting that terebrids have adapted to dietary changes that may have resulted from predator-prey relationships. The anatomical and phylogenetic results presented serve as a starting point to advance investigations about the role of predator-prey interactions in the diversification of the Terebridae and the impact on their peptide toxins, which are promising bioactive compounds for biomedical research and therapeutic drug development. (c) 2012 Elsevier Inc. All rights reserved.
Campagnes accessibles citées (14) [+] [-]ATIMO VATAE, BOA1, CONCALIS, EBISCO, MAINBAZA, MIRIKY, Restreint, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SANTO 2006, Restreint, TARASOC, TERRASSES
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Fedosov A. & Puillandre N. 2021. Deep Downunder: Integrative taxonomy of Austrobela , Spergo , Theta and Austrotheta (Gastropoda: Conoidea: Raphitomidae) from the deep sea of Australia. Journal of Zoological Systematics and Evolutionary Research 59(8): 1718-1753. DOI:10.1111/jzs.12512
Résumé [+] [-]Recent sampling efforts in the deep seas of southern and eastern Australia have generated a wealth of DNA-suitable material of neogastropods of the family Raphitomidae. Based on this material, a molecular phylogeny of the family has revealed a considerable amount of genus and species level lineages previously unknown to science. These taxa are now the focus of current integrative taxonomic research. As part of this ongoing investigation, this study focuses on the genera Austrobela, Austrotheta (both Criscione, Hallan, Puillandre & Fedosov, 2020), Spergo Dall, 1895 and Theta Clarke, 1959. We subjected a comprehensive mitochondrial DNA dataset of representative deep-sea raphitomids to Automatic Barcode Gap Discovery, which recognized 24 primary species hypotheses (PSHs). Following additional evaluation of shell and radular features, as well as examination of geographic and bathymetric ranges, 18 of these PSHs were converted to secondary species hypotheses (SSHs). Based on the evidence available, the most likely speciation mechanisms involved were evaluated for each pair of sister SSHs, including niche partitioning. Eleven SSHs were recognized as new and their systematic descriptions are provided herein. Of these, four were attributed to Austrobela, one to Austrotheta, four to Spergo and two to Theta. While all new species are endemic to Australian waters, other species studied herein exhibit wide Indo-Pacific distributions, adding to the growing body of evidence suggesting that wide geographic ranges in deep-sea Raphitomidae are more common than previously assumed.
Campagnes accessibles citées (19) [+] [-]AURORA 2007, BATHUS 3, BIOMAGLO, BIOPAPUA, CHALCAL 2, CONCALIS, EBISCO, KANADEEP, KARUBAR, KARUBENTHOS 2, NORFOLK 2, NanHai 2014, PAPUA NIUGINI, SALOMON 2, TAIWAN 2013, Restreint, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Puillandre N. & Fedosov A. 2021. Snails in depth: integrative taxonomy of Famelica, Glaciotomella and Rimosodaphnella (Conoidea: Raphitomidae) from the deep sea of temperate Australia. Invertebrate Systematics 35(8): 940-962. DOI:10.1071/IS21008
Résumé [+] [-]The deep sea of temperate south-eastern Australia appears to be a ‘hotspot’ for diversity and endemism of conoidean neogastropods of the family Raphitomidae. Following a series of expeditions in the region, a considerable amount of relevant DNA-suitable material has become available. A molecular phylogeny based on this material has facilitated the identification of diagnostic morphological characters, allowing the circumscription of monophyletic genera and the introduction of several new genus-level taxa. Both named and new genera are presently being investigated through integrative taxonomy, with the discovery of a significant number of undescribed species. As part of this ongoing investigation, our study focuses on the genera Famelica Bouchet & Warén, 1980, Glaciotomella Criscione, Hallan, Fedosov & Puillandre, 2020 and Rimosodaphnella Cossmann, 1914. We subjected a comprehensive mitochondrial DNA dataset of representative deep-sea raphitomids to the species delimitation methods ABGD and ASAP that recognised 18 and 15 primary species hypotheses (PSHs) respectively. Following additional evaluation of shell and radular features, and examination of geographic and bathymetric ranges, nine of these PSHs were converted to secondary species hypotheses (SSHs). Four SSHs (two in Famelica and two in Rimosodaphnella) were recognised as new, and formal descriptions are provided herein.
Campagnes accessibles citées (14) [+] [-]AURORA 2007, BIOPAPUA, BOA1, EXBODI, KANACONO, KAVIENG 2014, MAINBAZA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TARASOC, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Puillandre N. & Fedosov A. 2021. Where the snails have no name: a molecular phylogeny of Raphitomidae (Neogastropoda: Conoidea) uncovers vast unexplored diversity in the deep seas of temperate southern and eastern Australia. Zoological Journal of the Linnean Society 191(4): 961-1000. DOI:10.1093/zoolinnean/zlaa088
Résumé [+] [-]Abstract Although raphitomid snails are a dominant component of gastropod communities in deep seas worldwide, their systematics is still largely tentative. We assembled the most complete sampling of Raphitomidae from south-eastern Australia to date. Based on morphological and molecular data from this material, we produced a robust phylogenetic framework and used it to delimit genera. For the focus area, our results show a large proportion of undescribed species- and genus-level taxa, 11 of which are formally described herein. We demonstrate that the examination of purely morphological characters rarely suffices for the purpose of accurate genus delimitation. As a result, some traditionally highly diverse raphitomid genera (such as Gymnobela) turn out to be artificial assemblages of several unrelated, mostly undescribed, genus-level lineages. Our data suggest that comparable configurations of shell and radular features, observed at the genus level, commonly do not reflect true phylogenetic relationships. However, our results are inconclusive as to whether homoplasy or conservatism are the drivers of this phenomenon. Accommodating for the inevitable sampling biases, south-eastern Australia appears as a possible hotspot for both raphitomid diversity and endemism, when compared with adjacent areas.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Dettai A., Adamowizc S.J., Allcock L., Arango C.P., Barnes D.K., Barratt I., Chenuil A., Couloux A., Cruaud C., David B., Denis F., Denys G., Díaz A., Eléaume M., Féral J.P., Froger A., Gallut C., Grant R., Griffiths H.J., Held C., Hemery L.G., Hosie G., Kuklinski P., Lecointre G., Linse K., Lozouet P., Mah C., Monniot f., Norman M.D., O’hara T., Ozouf-costaz C., Piedallu C., Pierrat B., Poulin E., Puillandre N., Riddle M., Samadi S., Saucède T., Schubart C., Smith P.J., Stevens D.W., Steinke D., Strugnell J.M., Tarnowska K., Wadley V. & Ameziane N. 2011. DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey. Polar Science 5(2): 298-312. DOI:10.1016/j.polar.2011.02.002
Campagnes accessibles citées (1) [+] [-] -
Duperron S., Pottier M.A., Léger N., Gaudron S.M., Puillandre N., Le prieur S., Sigwart J.D., Ravaux J. & Zbinden M. 2012. A tale of two chitons: is habitat specialisation linked to distinct associated bacterial communities?. FEMS Microbiology Ecology 83(3): 552-567. DOI:10.1111/1574-6941.12014
Résumé [+] [-]Although most chitons (Mollusca: Polyplacophora) are shallow-water molluscs, diverse species also occur in deep-sea habitats. We investigated the feeding strategies of two species, Leptochiton boucheti and Nierstraszella lineata, recovered on sunken wood sampled in the western Pacific, close to the Vanuatu Islands. The two species display distinctly different associations with bacterial partners. Leptochiton boucheti harbours Mollicutes in regions of its gut epithelium and has no abundant bacterium associated with its gill. Nierstraszella lineata displays no dense gut-associated bacteria, but harbours bacterial filaments attached to its gill epithelium, related to the Deltaproteobacteria symbionts found in gills of the wood-eating limpet Pectinodonta sp. Stable carbon and nitrogen isotope signatures and an absence of cellulolytic activity give evidence against a direct wood-feeding diet; both species are secondary consumers within the wood food web. We suggest that the distinct associations with bacterial partners are linked to niche specialisations of the two species. Nierstraszella lineata is in a taxonomic family restricted to sunken wood and is possibly adapted to more anoxic conditions thanks to its gill-associated bacteria. Leptochiton boucheti is phylogenetically more proximate to an ancestral form not specialised on wood and may itself be more of a generalist; this observation is congruent with its association with Mollicutes, a bacterial clade comprising gutassociated bacteria occurring in several metazoan phyla
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fassio G., Russini V., Pusateri F., Giannuzzi-savelli R., Høisæter T., Puillandre N., Modica M.V. & Oliverio M. 2019. An assessment of Raphitoma and allied genera (Neogastropoda: Raphitomidae). Journal of Molluscan Studies. DOI:10.1093/mollus/eyz022
Résumé [+] [-]The systematics of several Eastern Atlantic conoidean species, traditionally ascribed to the genus Raphitoma Bellardi, 1847, are revised on the basis of DNA sequence data from three gene regions (cytochrome c oxidase subunit I, 16S rRNA and 12S rRNA). We assign genus ranking to three major lineages (Raphitoma, Cyrillia Kobelt, 1905 and Leufroyia Monterosato, 1884) and suggest that two West African species belong in the subgenus Daphnella (Paradaphne) Laseron, 1954. A new classification, based on molecular systematics and critical study of morphology, is provided for all Eastern Atlantic and Mediterranean species that are currently ascribed to Raphitoma s.l. The genus Clathromangelia Monterosato, 1884 is confirmed as belonging to Raphitomidae. Phylogenetic relationships and genetic distances suggest that Raphitoma maculosa Høisæter, 2016 and R. obesa Høisæter, 2016 may be divergent morphotypes of R. bicolor (Risso, 1826) and Cyrillia aequalis (Jeffreys, 1867), respectively.
Campagnes accessibles citées (5) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fassio G., Modica M.V., Mary L., Zaharias P., Fedosov A.E., Gorson J., Kantor Y.I., Holford M. & Puillandre N. 2019. Venom Diversity and Evolution in the Most Divergent Cone Snail Genus Profundiconus. Toxins 11(11): 623. DOI:10.3390/toxins11110623
Résumé [+] [-]Profundiconus is the most divergent cone snail genus and its unique phylogenetic position, sister to the rest of the family Conidae, makes it a key taxon for examining venom evolution and diversity. Venom gland and foot transcriptomes of Profundiconus cf. vaubani and Profundiconus neocaledonicus were de novo assembled, annotated, and analyzed for differential expression. One hundred and thirty-seven venom components were identified from P. cf. vaubani and 82 from P. neocaledonicus, with only four shared by both species. The majority of the transcript diversity was composed of putative peptides, including conotoxins, profunditoxins, turripeptides, insulin, and prohormone-4. However, there were also a significant percentage of other putative venom components such as chymotrypsin and L-rhamnose-binding lectin. The large majority of conotoxins appeared to be from new gene superfamilies, three of which are highly different from previously reported venom peptide toxins. Their low conotoxin diversity and the type of insulin found suggested that these species, for which no ecological information are available, have a worm or molluscan diet associated with a narrow dietary breadth. Our results indicate that Profundiconus venom is highly distinct from that of other cone snails, and therefore important for examining venom evolution in the Conidae family.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedesov A.E., Puillandre N., Herrmann M., Dgebuadze P. & Bouchet P. 2017. Phylogeny, systematics, and evolution of the family Costellariidae (Gastropoda: Neogastropoda). Zoological Journal of the Linnean Society 179(3): 541-626. DOI:https://doi.org/10.1111/zoj.12431
Résumé [+] [-]The neogastropod family Costellariidae is a large and successful group of carnivorous marine mollusks that encompasses about 475 living species. Costellariids are most diverse in the tropical Indo-Pacific at a depth interval of 0–200 m, where they are largely represented by numerous species commonly assigned to the genus Vexillum. The present work expands the taxon sampling of a previous phylogeny of the mitriform gastropods to resolve earlier problematic relationships, and thus establish a robust framework of the family, revise its taxonomy, and uncover major trends in the evolution of costellariid morphology. A multicuspidate rachidian is shown to have appeared at least twice in the evolutionary history of the family: it is regarded as an apomorphy of the primarily Indo-Pacific Vexillum–Austromitra–Atlantilux lineage, and has evolved independently in the Nodicostellaria–Mitromica lineage of the western hemisphere. The genera Ceratoxancus and Latiromitra are transferred from the Ptychatractidae to the Costellariidae. Tosapusia, Protoelongata, and Pusia are ranked as full genera, the latter with the three subgenera Pusia, Ebenomitra, and Vexillena. Vexillum (Costellaria) and Zierliana are treated as synonyms of Vexillum. The replacement name Suluspira is proposed for Visaya Poppe, Guillot de Suduiraut & Tagaro, 2006, non Ahyong, 2004 (Crustacea). We introduce four new genera, Alisimitra, Costapex, Turriplicifer, and Orphanopusia, and characterize their anatomy; 14 new species, mostly from deep water in the Indo-Pacific, are described in the genera Tosapusia, Alisimitra, Costapex, and Pusia. At least two species of Costapex gen. nov. have been collected from sunken wood.
Campagnes accessibles citées (29) [+] [-]ATIMO VATAE, AURORA 2007, BATHUS 3, BENTHAUS, BIOCAL, BIOPAPUA, BOA1, CONCALIS, EBISCO, EXBODI, KARUBENTHOS 2012, KAVIENG 2014, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 1, SALOMON 2, SALOMONBOA 3, SANTO 2006, SMIB 2, SMIB 4, TARASOC, TERRASSES, Tuhaa Pae 2013, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A.E. & Puillandre N. 2020. Integrative taxonomy of the Clavus canalicularis species complex (Drilliidae, Conoidea, Gastropoda) with description of four new species. Molluscan Research 40(3): 251-266. DOI:10.1080/13235818.2020.1788695
Résumé [+] [-]The conoidean family Drilliidae Olsson, 1964 is a species-rich lineage of marine gastropods, showing a high degree of diversification in comparison to other families of Conoidea. Despite intensive molecular phylogenetic studies during the last decade that have led to notable rearrangements of conoidean systematics, the genus- and species-level taxonomy of Drilliidae has not thus far been affected and remains entirely based on shell features. In the current study we revisit species delimitation in a morphological cluster of species from the Indo-Pacific referred to as the Clavus canalicularis complex, using an integrative taxonomy approach. The species in the complex possess robust thick-walled shells typically over 15 mm in height with sculpture of prominent rounded nodules located at the whorl’s shoulder, sometimes sharp and squamiform, or producing long spines. We find that in addition to five known species, the complex comprises four new species. These are described as Clavus brianmayi n. sp. (New Caledonia), Clavus davidgilmouri n. sp. (the Philippines), Clavus andreolbrichi n. sp. (Vanuatu and New Ireland) and Clavus kirkhammetti n. sp. (Madagascar). Clavus exasperatus (Reeve, 1843), which was previously considered widely distributed in IndoPacific, is shown to be confined to the western Indian Ocean.
Campagnes accessibles citées (5) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A., Puillandre N., Kantor Y. & Bouchet P. 2015. Phylogeny and systematics of mitriform gastropods (Mollusca: Gastropoda: Neogastropoda): Phylogeny of Mitriform Gastropods. Zoological Journal of the Linnean Society 175(2): 336-359. DOI:10.1111/zoj.12278
Résumé [+] [-]With about 800 Recent species, ‘miters’ are a widely distributed group of tropical and subtropical gastropods that are most diverse in the Indo-West Pacific. They include the two families Mitridae and Costellariidae, similar in shell morphology and traditionally treated as close relatives. Some genera of deep-water Ptychatractidae and Volutomitridae are close to miters in shell morphology, and the term ‘mitriform gastropods’ has been introduced to refer to Mitridae, Costellariidae, and this assortment of convergent forms. The present study aimed at the reconstruction of phylogenetic relationships of mitriform gastropods based on representative taxon sampling. Four genetic markers [cytochrome c oxidase subunit I (COI), 16S and 12S rRNA mitochondrial genes, and H3 (Histone 3) nuclear gene] were sequenced for over 90 species in 20 genera, and the molecular data set was supplemented by studies of radula morphology. Our analysis recovered Mitridae as a monophyletic group, whereas the genus Mitra was found to be polyphyletic. Of 42 mitrid species included in the analysis, 37 formed a well-supported ‘core Mitridae’ consisting of four major clades, three of them consistent with the subfamilies Cylindromitrinae, Imbricariinae, and Mitrinae, and Strigatella paupercula standing out by itself. Basal to the ‘core Mitridae’ are four minor lineages, with the genus Charitodoron recognized as sister group to all other Mitridae. The deepwater family Pyramimitridae shows a sister relationship to the Mitridae, with high support for a Pyramimitridae + Mitridae clade. Our results recover the monophyly of the Costellariidae, which form a wellsupported clade that also includes Ptychatractidae, Columbariinae, and Volutomitridae, but not Mitridae. Most derived and diverse amongst Costellariidae are species of Vexillum, characterized by a bow-shaped, multicuspidate rachidian tooth. Several previously unrecognized deep-water costellariid lineages are revealed. Their members retain some plesiomorphies – in particular a tricuspidate rachidian tooth – that makes them morphologically intermediate between ptychatractids and Vexillum. The taxa of Ptychatractidae included in the analysis are not monophyletic, but form three well-supported, unrelated groupings, corresponding respectively to Ceratoxancus + Latiromitra, Exilia, and Exiliodea. None of them shows an affinity to Pseudolividae.
Campagnes accessibles citées (21) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CONCALIS, EBISCO, EXBODI, INHACA 2011, MAINBAZA, MIRIKY, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, TARASOC, TERRASSES, Tuhaa Pae 2013, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A., Puillandre N., Herrmann M., Kantor Y., Oliverio M., Dgebuadze P., Modica M.V. & Bouchet P. 2018. The collapse of Mitra: molecular systematics and morphology of the Mitridae (Gastropoda: Neogastropoda). Zoological Journal of the Linnean Society 20: 1-85. DOI:10.1093/zoolinnean/zlx073/4855867
Résumé [+] [-]Alongside confirmation of the monophyly of the gastropod family Mitridae, a recent molecular phylogenetic analysis disclosed multiple inconsistencies with the existing taxonomic framework. In the present study, we expanded the molecular sampling to 103 species, representing 26% of the 402 extant species currently accepted in the family and 16 of the 19 currently accepted extant genera; 83 species were sequenced for four molecular markers [cytochrome c oxidase subunit I (COI), 16S and 12S rRNA, and H3 (Histone 3)]. Molecular analyses were supplemented by morphological studies, focused on characters of the radula and, in a more restricted data set, proboscis anatomy. These data form the basis for a revised classification of the Mitridae. A first dichotomy divides mitrids into two unequal clades, Charitodoron and the Mitridae s.s. Species of Charitodoron show profound differences to all other Mitridae in foregut anatomy (lacking an epiproboscis) and shell morphology (smooth columella, bulbous protoconch of non-planktotrophic type), which leads to the erection of the separate family Charitodoronidae fam. nov. Three traditional subfamilies (Mitrinae, Cylindromitrinae and Imbricariinae) correspond to three of the inferred phylogenetic lineages of Mitridae s.s.; we redefine their contents, reinstate Strigatellinae Troschel, 1869 as valid and establish the new subfamily Isarinae. In the absence of molecular material, a sixth subfamily, Pleioptygmatinae, is included in Mitridae based on morphological considerations only. To resolve the polyphyly of Mitra and Cancilla in their current taxonomic extension, we reinstate the genera Episcomitra Monterosato, 1917, Isara H. & A. Adams, 1853 and Probata Sarasúa, 1989 and establish 11 new genera: Quasimitra, Roseomitra, Fusidomiporta, Profundimitra, Cancillopsis, Pseudonebularia, Gemmulimitra and Neotiara in Mitrinae; Imbricariopsis in Imbricariinae; Carinomitra and Condylomitra are left unassigned to a subfamily. Altogether 32 genera are recognized within the family. Their diversity and distribution are discussed, along with general trends in morphological evolution of the family.
Campagnes accessibles citées (26) [+] [-]ATIMO VATAE, AURORA 2007, BIOCAL, BIOPAPUA, BOA1, CONCALIS, CORAIL 2, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMONBOA 3, SANTO 2006, SMIB 4, TARASOC, Tuhaa Pae 2013, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A., Zaharias P. & Puillandre N. 2021. A phylogeny-aware approach reveals unexpected venom components in divergent lineages of cone snails. Proceedings of the Royal Society B: Biological Sciences 288(1954): 20211017. DOI:10.1098/rspb.2021.1017
Résumé [+] [-]Marine gastropods of the genus Conus are renowned for their remarkable diversity and deadly venoms. While Conus venoms are increasingly well studied for their biomedical applications, we know surprisingly little about venom composition in other lineages of Conidae. We performed comprehensive venom transcriptomic profiling for Conasprella coriolisi and Pygmaeconus traillii, first time for both respective genera. We complemented referencebased transcriptome annotation by a de novo toxin prediction guided by phylogeny, which involved transcriptomic data on two additional ‘divergent’ cone snail lineages, Profundiconus, and Californiconus. We identified toxin clusters (SSCs) shared among all or some of the four analysed genera based on the identity of the signal region—a molecular tag present in toxins. In total, 116 and 98 putative toxins represent 29 and 28 toxin gene superfamilies in Conasprella and Pygmaeconus, respectively; about quarter of these only found by semi-manual annotation of the SSCs. Two rare gene superfamilies, originally identified from fish-hunting cone snails, were detected outside Conus rather unexpectedly, so we further investigated their distribution across Conidae radiation. We demonstrate that both these, in fact, are ubiquitous in Conidae, sometimes with extremely high expression. Our findings demonstrate how a phylogeny-aware approach circumvents methodological caveats of similarity-based transcriptome annotation
Campagnes accessibles citées (2) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Caballer gutierrez M., Buge B., Sorokin P.V., Puillandre N. & Bouchet P. 2019. Mapping the missing branch on the neogastropod tree of life: molecular phylogeny of marginelliform gastropods. Journal of Molluscan Studies 85(4): 439-451. DOI:10.1093/mollus/eyz028
Résumé [+] [-]Marginelliform gastropods are a heterogeneous and diverse group of molluscs encompassing over 1,600 living species, among which are the smallest known neogastropods. The relationships of marginelliform gastropods within the order Neogastropoda are controversial, and the monophyly of the two marginelliform families the Marginellidae J. Fleming, 1828 and the Cystiscidae Stimpson, 1865, remains unconfirmed. DNA sequence data have never been used to assess the relationships of the marginelliform gastropods, making this group the only major branch missing in our current understanding of the neogastropod tree of life. Here we report results of the first multilocus phylogenetic analysis of marginelliform gastropods, which is based on a dataset comprising 63 species (20 genera) of Marginellidae and Cystiscidae, and a wide range of neogastropod lineages. The Marginellidae and Cystiscidae form a moderately supported clade that is sister to the family Volutidae. Marginellona gigas appears to be sister to all other marginelliforms. The subfamily Marginellinae was recovered as a well-supported clade, and good resolution of this part of the tree makes it possible to propose amendments to the family-level classification of the group. The relationship between Granulina and other marginelliforms could not be resolved and requires further study. Due to poor resolution of basal relationships within the Marginellidae–Cystiscidae clade, the monophyly of the Cystiscidae was neither confirmed nor convincingly rejected. The shell morphology of most marginellid and cystiscid genera is taxonomically not very informative but, nevertheless, of the traditionally recognized genera only Gibberula and Dentimargo were shown to be polyphyletic. Although a comprehensive systematic revision of the group requires more extensive taxonomic sampling (e.g. with better representation of the type species of nominal genus-group names), our results support the superfamily Volutoidea, comprising four families (Volutidae, Cystiscidae, Marginellidae and Marginellonidae), with the placement of the Granulinidae uncertain for the time being.
Campagnes accessibles citées (15) [+] [-]ATIMO VATAE, Restreint, DongSha 2014, EXBODI, GUYANE 2014, ILES DU SALUT, INHACA 2011, KANACONO, KARUBENTHOS 2, KAVIENG 2014, MADEEP, MADIBENTHOS, MAINBAZA, PAPUA NIUGINI, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Malcolm G., Terryn Y., Gorson J., Modica M.V., Holford M. & Puillandre N. 2019. Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea). Journal of Molluscan Studies 85(4): 359-388. DOI:10.1093/mollus/eyz004
Résumé [+] [-]The conoidean family Terebridae is an intriguing lineage of marine gastropods, which are of considerable interest due to their varied anatomy and complex venoms. Terebrids are abundant, easily recognizable and widely distributed in tropical and subtropical waters, but our findings have demonstrated that their systematics requires revision. Here we elaborate the classification of Terebridae based on a recently published molecular phylogeny of 154 species, plus characters of the shell and anterior alimentary system. The 407 living species of the family, including seven species described herein, are assigned to three subfamilies: Pellifroniinae new subfamily, Pervicaciinae and Terebrinae. The Pellifroniinae comprises five deep-water species in two genera, Pellifronia and Bathyterebra n. gen. Pellifroniinae possess a radula of duplex marginal teeth, well-developed proboscis and venom gland, and a very small rhynchodeal introvert. The Pervicaciinae includes c. 50 species in the predominantly Indo-Pacific genera Duplicaria and Partecosta. Pervicaciinae possess salivary glands, a radula of solid recurved marginal teeth and a weakly developed rhynchodeal introvert, but lack proboscis and venom gland. The remaining Terebridae species are classified into 15 genera in the subfamily Terebrinae (including four genera described herein); nine genera are defined on the basis of phylogenetic data and six solely on shell morphology. The Indo-Pacific genera Profunditerebra n. gen., Maculauger n. gen. and Myurellopsis n. gen. each include about a dozen species. The first is restricted to the deep waters of the Indo-West Pacific, while the latter two range widely in both geographic and bathymetric distribution. Neoterebra n. gen. encompasses about 65 species from a range of localities in the eastern Pacific, Caribbean, and Atlantic, and from varying depths. To characterize the highly diversified genera Terebra, Punctoterebra, Myurella and Duplicaria, each of which comprise several morphological clusters, we propose the use of DNA-based diagnoses. These diagnoses are combined with more informative descriptions to define most of the supraspecific taxa of Terebridae, to provide a comprehensive revision of the group.
Campagnes accessibles citées (20) [+] [-]ATIMO VATAE, CONCALIS, EXBODI, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MADEEP, Restreint, MIRIKY, MUSORSTOM 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SANTO 2006, TERRASSES, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Fedosov A.E. & Puillandre N. 2012. Phylogeny and taxonomy of the Kermia–Pseudodaphnella (Mollusca: Gastropoda: Raphitomidae) genus complex: a remarkable radiation via diversification of larval development. Systematics and Biodiversity 10(4): 447-477. DOI:10.1080/14772000.2012.753137
Résumé [+] [-]Conoidean gastropods of the genera Kermia, Oliver, and Pseudodaphnella Boettger, (Raphitomidae) are common in shallow-water habitats of the tropical Indo-Pacific. They form a distinct morphologically homogeneous complex, easily recognizable by sculpture and colour pattern, encompassing around 80 described species. Examination of a vast material accumulated during recent expeditions in various regions of the Indo-Pacific revealed a number of undescribed species of this complex. Our material included 32 morphospecies available for molecular phylogenetic study; phylogenetic reconstruction based on the COI gene confirmed the species hypotheses based on morphological characters. A total of 18 terminal taxa were attributed to known species and 14 were identified as new species. Of these, 12 species, for which sufficient material was available, are described. Phylogenetic analysis indicated close relationships of the genera Kermia and Pseudodaphnella with members of some other conoidean genera (specifically Exomilus Hedley, , Paramontana Laseron, and Thetidos Hedley, ) and taxonomic implications of the data obtained are discussed. To test the taxonomic value of protoconch and review its wide use in classification of Conoidea, the evolution of the protoconch morphology was reconstructed using a phylogenetic tree. It has revealed that protoconchs of different types may appear in closely related species, sometimes hardly distinguishable by teleoconch morphology. A switch from planctotrophic to non-planctotrophic mode of development occurred at least four times in the evolutionary history of the Kermia Pseudodaphnella complex, indicating high developmental plasticity of the group. Its role in radiation of the Kermia Pseudodaphnella complex and applications for use of protoconch morphology in the classification of Conoidea are discussed.
Campagnes accessibles citées (8) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Stahlschmidt P., Puillandre N., Aznar-cormano L. & Bouchet P. 2017. Not all spotted cats are leopards: evidence for a Hemilienardia ocellata species complex (Gastropoda: Conoidea: Raphitomidae). European Journal of Taxonomy 268: 1-20. DOI:10.5852/ejt.2017.268
Résumé [+] [-]The small conoidean Hemilienardia ocellata is one of the easily recognizable Indo-Pacific “turrids”, primarily because of its remarkable eyespot colour pattern. Morphological and molecular phylogenetic analyses revealed four species that share this “characteristic” colour pattern but demonstrate consistent differences in size and shell proportions. Three new species – Hemilienardia acinonyx sp. nov. from the Philippines, H. lynx sp. nov. from Papua New Guinea and H. pardus sp. nov. from the Society and Loyalty Islands – are described based on the results of phylogenetic analyses. Although the H. ocellata species complex clade falls in a monophyletic Hemilienardia, H. ocellata and H. acinonyx sp. nov. possess a radula with semi-enrolled or notably flattened triangular marginal teeth, a condition that diverges substantially from the standard radular morphology of Hemilienardia and other raphitomids.
Campagnes accessibles citées (8) [+] [-]
Codes des collections associés: IM (Mollusques) -
Galindo L.A., Puillandre N., Strong E.E. & Bouchet P. 2014. Using microwaves to prepare gastropods for DNA barcoding. Molecular Ecology Resources 14(4): 700-705. DOI:10.1111/1755-0998.12231
Résumé [+] [-]Extracting DNA from gastropods presents particular difficulties due to the capacity of the living animal to retract into the shell, resulting in poor penetration of the ethanol into the tissues. Because the shell is essential to establish the link between sequences and traditional taxonomic identity, cracking the shell to facilitate fixation is not ideal. Several methods are currently in routine use to overcome this difficulty, including chemical relaxation, drilling the shell and boiling. Most of these methods are time-consuming, may be safety hazards and constitute a bottleneck in the preparation of large numbers of specimens in the field. We have experimented with a method traditionally used to clean shells that involves placing the living gastropods in a microwave (MW) oven; the electromagnetic radiation very quickly heats both the animal and the water trapped inside the shell, resulting in separation of the muscles that anchor the animal to the shell. Done properly, the body can be removed intact from the shell and the shell voucher is preserved undamaged. To test the method, the bodies of live-collected specimens from two gastropod species were separated from their shell by microwaving and by anesthetizing/drilling. After identical extraction and PCR procedures, the gels showed no difference in DNA quantity or quality, and the resulting sequences are identical within species. The method was then implemented on a large scale during expeditions, resulting in higher percentage of DNA extraction success. The MWs are also effective for quickly and easily removing other molluscs from their shells, that is, bivalves and scaphopods. Workflows implementing the MW technique show a three- to fivefold increase in productivity compared with other methods.
Campagnes accessibles citées (8) [+] [-]ATIMO VATAE, AURORA 2007, KARUBENTHOS 2012, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SANTO 2006, Restreint
Codes des collections associés: IM (Mollusques) -
Galindo L.A., Puillandre N., Utge J., Lozouet P. & Bouchet P. 2016. The phylogeny and systematics of the Nassariidae revisited (Gastropoda, Buccinoidea). Molecular Phylogenetics and Evolution 99: 337-353. DOI:10.1016/j.ympev.2016.03.019
Résumé [+] [-]Nassariidae are a group of scavenging, predominantly marine, snails that are diversified on soft bottoms as well as on rocky shores, and are the subject of numerous research papers in ecology, ecotoxicology or paleontology. A weak and/or apparently continuous variation in shell characters has resulted in an intimidating taxonomy, with complex synonymy lists. Over 1320 extant nominal species have been described, of which 442 are currently regarded as valid. Above species level, the state of the art is equally hazy, with four subfamilies and twelve genera currently accepted, and many other names in the graveyard of synonymy. A molecular analysis based on three mitochondrial (COI, 16S, 12S) and two nuclear (28S, H3) markers was conducted. Our dataset includes 218 putative nassariid species, comprising 9 of the 12 valid genera, and 25 nominal genera represented by their type species. The monophyly of the Nassariidae as classically construed is not confirmed. Species of Antillophos, Engoniophos, Phos, Nassaria, Tomlinia and Anentome (formerly considered Buccinidae) are included inside the Nassariidae clade. Within the Nassariinae, the tree unexpectedly demonstrates that species from the Atlantic and the Indo-Pacific form different clades which represent several independent diversification events. Through an integrative approach, the reconstruction of ancestral states was addressed for eight characters supposedly informative for taxonomy. Using numerous fossil calibration points, Nassariidae appear to have originated 120 MYA ago in Atlantic temperate waters during the Lower Cretaceous. Our results have a profound impact on nassariid taxonomy, especially with regard to the validity of subfamily- and genus-level names.
Campagnes accessibles citées (19) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CONCALIS, EBISCO, EXBODI, INHACA 2011, KARUBENTHOS 2012, LIFOU 2000, MAINBAZA, MIRIKY, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SALOMONBOA 3, SANTO 2006, TARASOC, TERRASSES
Codes des collections associés: IM (Mollusques) -
Hallan A., Criscione F., Fedosov A. & Puillandre N. 2021. Few and far apart: integrative taxonomy of Australian species of Gladiobela and Pagodibela (Conoidea : Raphitomidae) reveals patterns of wide distributions and low abundance. Invertebrate Systematics. DOI:10.1071/IS20017
Résumé [+] [-]The deep-sea malacofauna of temperate Australia remains comparatively poorly known. However, a recent influx of DNA-suitable material obtained from a series of deep-sea cruises has facilitated integrative taxonomic study on the Conoidea (Caenogastropoda : Neogastropoda). Building on a recent molecular phylogeny of the conoidean family Raphitomidae, this study focussed on the genera Gladiobela and Pagodibela (both Criscione, Hallan, Puillandre & Fedosov, 2020). We subjected a representative mtDNA cox1 dataset of deep-sea raphitomids to ABGD, which recognised 14 primary species hypotheses (PSHs), 9 of which were converted to secondary species hypotheses (SSHs). Following the additional examination of the shell and hypodermic radula features, as well as consideration of bathymetric and geographic data, seven of these SSHs were recognised as new to science and given full species rank. Subsequently, systematic descriptions are provided herein. Of these, five are attributed to Gladiobela (three of which are endemic to Australia and two more widely distributed) and two are placed in Pagodibela (one endemic to southern Australia and one widespread in the Pacific). The rarity of many ‘turrids’ reported in previous studies is confirmed herein, as particularly indicated by highly disjunct geographic records for two taxa. Additionally, several of the studied taxa exhibit wide Indo-Pacific distributions, suggesting that wide geographic ranges in deep-sea ‘turrids’ may be more common than previously assumed. Finally, impediments to deep-sea ‘turrid’ taxonomy in light of such comparative rarity and unexpectedly wide distributions are discussed.
Campagnes accessibles citées (13) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, BOA1, EBISCO, EXBODI, KANACONO, KARUBAR, PAPUA NIUGINI, SALOMON 2, TARASOC, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Holford M., Puillandre N., Terryn Y., Cruaud C., Olivera B. & Bouchet P. 2009. Evolution of the Toxoglossa Venom Apparatus as Inferred by Molecular Phylogeny of the Terebridae. Molecular Biology and Evolution 26(1): 15-25. DOI:10.1093/molbev/msn211
Résumé [+] [-]Toxoglossate marine gastropods, traditionally assigned to the families Conidae, Terebridae, and Turridae, are one of the most populous animal groups that use venom to capture their prey. These marine animals are generally characterized by a venom apparatus that consists of a muscular venom bulb and a tubular venom gland. The toxoglossan radula, often compared with a hypodermic needle for its use as a conduit to inject toxins into prey, is considered a major anatomical breakthrough that assisted in the successful initial radiation of these animals in the Cretaceous and early Tertiary. The pharmacological success of toxins from cone snails has made this group a star among biochemists and neuroscientists, but very little is known about toxins from the other Toxoglossa, and the phylogeny of these families is largely in doubt. Here we report the first molecular phylogeny for the Terebridae and use the results to infer the evolution of the venom apparatus for this group. Our findings indicate that most of the genera of terebrids are polyphyletic, and one species ("Terebra" (s.l.) jungi) is the sister group to all other terebrids. Molecular analyses combined with mapping of venom apparatus morphology indicate that the Terebridae have lost the venom apparatus at least twice during their evolution. Species in the genera Terebra and Hastula have the typical venom apparatus found in most toxoglossate gastropods, but all other terebrid species do not. For venomous organisms, the dual analysis of molecular phylogeny and toxin function is an instructive combination for unraveling the larger questions of phylogeny and speciation. The results presented here suggest a paradigm shift in the current understanding of terebrid evolution, while presenting a road map for discovering novel terebrid toxins, a largely unexplored resource for biomedical research and potential therapeutic drug development.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Houart R., Zuccon D. & Puillandre N. 2019. Description of new genera and new species of Ergalataxinae (Gastropoda: Muricidae). Novapex 20(HS 12): 1-52
Résumé [+] [-]The recent genetic analysis of the muricid subfamily Ergalataxinae has led to a better understanding of this subfamily, but some species were left without appropriate generic assignments and the classification of others required revision. This knowledge gap is partially filled herein, with new combinations and the description of three new genera. The examination of new material, along with a careful re-examination of and comparison to existing material, resulted also in the identification of nine new species. These new genera and new species are described herein, lectotypes are designated and new combinations are given. The geographical range of all the new species is provided on maps. All new species are compared with related or similar species. The radula of Morula palmeri Powell, 1967 is illustrated for the first time.
Campagnes accessibles citées (37) [+] [-]ATIMO VATAE, AURORA 2007, BATHUS 2, BENTHEDI, BERYX 11, BIOCAL, BIOMAGLO, BORDAU 2, CHALCAL 2, EBISCO, EXBODI, KANACONO, KANADEEP, KARUBENTHOS 2, LIFOU 2000, MAINBAZA, MD32 (REUNION), Restreint, MIRIKY, MUSORSTOM 6, MUSORSTOM 7, MUSORSTOM 8, MUSORSTOM 9, NORFOLK 1, NORFOLK 2, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SANTO 2006, SMCB, SMIB 3, SMIB 4, SMIB 5, SMIB 8, TERRASSES, Walters Shoal
Codes des collections associés: IM (Mollusques) -
Kantor Y., Fedosov A.E., Puillandre N., Bonillo C. & Bouchet P. 2017. Returning to the roots: morphology, molecular phylogeny and classification of the Olivoidea (Gastropoda: Neogastropoda). Zoological Journal of the Linnean Society 180: 493-541. DOI:10.1093/zoolinnean/zlw003
Résumé [+] [-]The superfamily Olivoidea is broadly distributed in the world’s oceans mostly in coastal waters at tropical and subtropical latitudes. It encompasses around 30 Recent genera and 460 species. Two families – Olividae and Olivellidae – are classically recognized within the superfamily. Their shell is very characteristic due to the presence of a modified callused anterior end and a fasciole. Prior to the present work, neither the monophyly of the superfamily nor the relationships among its genera had been tested with molecular phylogenetics. Four genetic markers [cytochrome c oxidase subunit I (COI), 16S and 12S rRNA mitochondrial genes, and Histone 3 (H3) nuclear gene] were sequenced for 42 species in 14 genera. Additionally, 18 species were sequenced for COI only. The molecular dataset was supplemented by anatomical and radula data. Our analysis recovered, albeit with weak support, a monophyletic Olivoidea, which in turn includes with 100% support, in addition to traditional olivoideans, representatives of a paraphyletic Pseudolividae. The relationships between the former families and subfamilies are drastically revised and a new classification of the superfamily is here proposed, now including five families: Bellolividae fam. nov., Benthobiidae fam. nov., Olividae, Pseudolividae and Ancillariidae. Within Olividae four subfamilies are recognized, reflecting the high morphological disparity within the family: Olivinae, Olivellinae, Agaroniinae and Calyptolivinae subfam. nov. All the recent genera are discussed and reclassified based on molecular phylogeny and/or morphology and anatomy. The homology of different features of the shells is established for the first time throughout the superfamily, and a refined terminology is proposed. Based on a correlation between anatomical characteristics and shell features and observations of live animals, we make hypotheses on which part of the mantle is responsible for depositing which callused feature of the shell. Our results demonstrate that morphological data alone should be used with caution for phylogenetic reconstructions. For instance, the radula – that is otherwise considered to be of fundamental importance in the taxonomy of Neogastropoda – is extremely variable within the single family Olividae, with a range of variation larger than within the rest of the entire superfamily. In the refined classification, Pseudolividae are nested within Olivoidea, which is partially returning to ‘the roots’, that is to the classification of Thiele (1929).
Campagnes accessibles citées (21) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CONCALIS, Restreint, EBISCO, INHACA 2011, KARUBENTHOS 2012, KAVIENG 2014, MAINBAZA, MIRIKY, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, TARASOC, TERRASSES
Codes des collections associés: IM (Mollusques) -
Kantor Y., Fedosov A. & Puillandre N. 2018. New and unusual deep-water Conoidea revised with shell, radula and DNA characters. Ruthenica 28(2): 47-82
Résumé [+] [-]In the course of preparation of a new molecular phylogeny of Conoidea based on exon-capture some new species and species with notable morphology were revealed. The taxonomy of these species is discussed and the radula of most of them illustrated for the first time. New genera are described: Comispira gen. nov. (Cochlespiridae), type species Leucosyrinx mai Li et Li, 2008; Pagodaturris gen. nov. (Clavatulidae), type species Pleurotoma molengraaffi Tesch, 1915. New species described: Comispira compta gen. et sp. nov., Sibogasyrinx sangeri sp. nov. (both Cochlespiridae), Pagodaturris philippinensis gen. et sp. nov. (Clavatulidae), Horaiclavus micans sp. nov., Iwaoa invenusta sp. nov. (both Horaiclavidae), Lucerapex cracens sp. nov., Lucerapex laevicarinatus sp. nov. (Turridae), Heteroturris kanacospira sp. nov. (Borsoniidae). Epideira Hedley, 1918 is reallocated from Pseudomelatomidae to Horaiclavidae. The radulae of Kuroshioturris nipponica (Shuto, 1961) (Turridae), Leucosyrinx verrillii (Dall, 1881), and Leucosyrinx luzonica (Powell, 1969) comb. nov. are illustrated for the first time.
Campagnes accessibles citées (19) [+] [-]AURORA 2007, BIOPAPUA, CEAMARC-AA, CONCALIS, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, MADEEP, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, SANTO 2006, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Horro J., Rolán E. & Puillandre N. 2018. Paraclavatula (Gastropoda: Conoidea: Clavatulidae), a new genus with a distinctive radula type from West Africa. Journal of Molluscan Studies 84(3): 275-284. DOI:10.1093/mollus/eyy012
Résumé [+] [-]A unique radular configuration for Conoidea, consisting of five teeth in a transverse row (acuspate platelike central and laterals, and duplex marginal teeth), was found in three species previously described in the genus Clavatula: C. delphinae, C. pseudomystica and C. christianae. Analysis of the COI gene demonstrated that they belong to the family Clavatulidae. Paraclavatula n. gen. is described. No similar radulae have been found previously among Conoidea and their morphology suggests that the presence of well-defined lateral teeth is more broadly distributed within Conoidea than previously anticipated. Based on radular morphology alone, it would not be possible to attribute the genus to any presently recognized family of Conoidea.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Puillandre N. & Bouchet P. 2020. The challenge of integrative taxonomy of rare, deep-water gastropods: the genus Exilia (Neogastropoda: Turbinelloidea: Ptychatractidae). Journal of Molluscan Studies 86(2): 120-138. DOI:10.1093/mollus/eyz037
Résumé [+] [-]According to a recent taxonomic revision by Kantor et al. (2001), the neogastropod genus Exilia Conrad, 1860, comprises ten mostly rare species that live at depths between 200 and 2000 m. Adult Exilia measure between 30 and 90 mm in shell length, and the genus is mostly represented in museum collections by empty shells. The abundance of this genus is low in the wild, but recent expeditions organized by the Muséum national d’Histoire naturelle have yielded several dozen specimens. These new collections include samples preserved for molecular studies. Here, we present the results of the first molecular systematic study of Exilia. Our aim was to investigate the species limits proposed by Kantor et al. (2001) on the basis of shell and anatomical characters. Analysis of DNA sequence data for the cytochrome c oxidase I gene suggests that Exilia hilgendorfi, previously considered to be a single, polymorphic and broadly distributed species, is a complex of at least six species (four of which we sequenced). Two of these species, Exilia cognata n. sp. and E. fedosovi n. sp., are described as new to science. Exilia gracilior, E. claydoni and E. prellei are resurrected from the synonymy of Exilia hilgendorfi; of these three, only the last was sequenced. Exilia vagrans is a welldefined taxon, but our molecular systematic data shows that it consists of two distinct species, which occur sympatrically off Taiwan and are strikingly similar in shell and radular morphology; due to the absence of DNA sequence data from the type locality of E. vagrans (Vanuatu), it is unclear to which of these two species the name would apply. Exilia karukera n. sp., which is conchologically very similar to E. vagrans, was discovered off Guadeloupe, represents the first record of the genus from the Atlantic. For E. elegans, which was previously known only from a single shell, we provide new data including new distributional records (South Africa and the Mozambique Channel), details of the radula and DNA sequence data.
Campagnes accessibles citées (19) [+] [-]ATIMO VATAE, AURORA 2007, BORDAU 2, CONCALIS, DongSha 2014, KANACONO, KANADEEP, KARUBENTHOS 2, MAINBAZA, MIRIKY, MUSORSTOM 8, NORFOLK 2, NanHai 2014, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TAIWAN 2013, TARASOC, TERRASSES
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Fedosov A.E., Kosyan A.R., Puillandre N., Sorokin P.A., Kano Y., Clark R. & Bouchet P. 2022. Molecular phylogeny and revised classification of the Buccinoidea (Neogastropoda). Zoological Journal of the Linnean Society 194(3): 789-857. DOI:10.1093/zoolinnean/zlab031
Résumé [+] [-]Abstract The superfamily Buccinoidea is distributed across the oceans of the world from the Arctic Ocean to the Antarctic and from intertidal to abyssal depths. It encompasses 3351 recent species in 337 genera. The latest taxonomic account recognized eight full families. For the first time, the monophyly of the superfamily and the relationships among the families are tested with molecular data supplemented by anatomical and radula data. Five genetic markers were used: fragments of mitochondrial COI, 16S rRNA, 12S rRNA and nuclear Histone 3 (H3) and 28S rRNA genes (for 225 species of 117 genera). Our analysis recovered Buccinoidea monophyletic in Bayesian analyses. The relationships between the formerly recognized families and subfamilies are drastically revised and a new classification of the superfamily is here proposed, now including 20 taxa of family rank and 23 subfamilies. Five new families (Chauvetiidae, Dolicholatiridae, Eosiphonidae, Prodotiidae and Retimohniidae) and one subfamily of Nassariidae (Tomliniinae) are described. Austrosiphonidae and Tudiclidae are resurrected from synonymy and employed in a new taxonomical extension. All but 40 recent genera are reclassified. Our results demonstrate that anatomy is rather uniform within the superfamily. With exceptions, the rather uniform radular morphology alone does not allow the allocation of genera to a particular family without additional molecular data.
Campagnes accessibles citées (42) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, BOA1, CEAMARC-AA, CHALCAL 2, CONCALIS, CORSICABENTHOS 1, Restreint, Restreint, DongSha 2014, EBISCO, GUYANE 2014, ILES DU SALUT, INHACA 2011, KANACONO, KARUBENTHOS 2, KARUBENTHOS 2012, KAVALAN 2018, KOUMAC 2.1, KOUMAC 2.3, MADIBENTHOS, MAINBAZA, MIRIKY, MUSORSTOM 4, Restreint, NORFOLK 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, TAIWAN 2000, TAIWAN 2004, TARASOC, TERRASSES, Tuhaa Pae 2013, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Puillandre N., Olivera B.M. & Bouchet P. 2008. Morphological Proxies for Taxonomic Decision in Turrids (Mollusca, Neogastropoda): a Test of the Value of Shell and Radula Characters Using Molecular Data. Zoological Science 25(11): 1156-1170. DOI:10.2108/zsj.25.1156
Résumé [+] [-]The state of the art of turrid (=Turridae s. l.) systematics is that shells- when they include the protoconch - are reliable species-level identifiers, but inadequate proxies for allocation to genera or subfamilies. Generally, the radula is used for allocation to a (sub)family, but the hypothesis that the radula is a more adequate proxy than the shell for relationships has not yet been tested by molecular data. Species of Xenuroturris may have drastically different radulae, with either "'semi-enrolled" or "duplex" marginal teeth, although their shells are very similar or even almost indistinguishable. Molecular data confirm that specimens with different types of radulae constitute different species, but two species of a pair with respectively semi-enrolled and duplex teeth end up being not closely related. However, it is still unresolved whether species with semi-enrolled (=Iotyrris) and duplex teeth (=Xenuroturris) form two supported monophyletic clades. Iotyrris devoizei n.sp. and I. musivum n.sp. are described from Vanuatu, where they occur sympatrically with I. cingulifera and Xenuroturris legitima.
Campagnes accessibles citées (4) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Strong E.E. & Puillandre N. 2012. A new lineage of Conoidea (Gastropoda: Neogastropoda) revealed by morphological and molecular data. Journal of Molluscan Studies 78(3): 246-255. DOI:10.1093/mollus/eys007
Résumé [+] [-]The hyperdiverse group of venomous Conoidea has eluded attempts to construct a robust and stable classification owing to the absence of a robust and stable phylogenetic framework. New molecular data have greatly enhanced our understanding of conoidean evolution, allowing the construction of a new family-level classification. This expanding framework has also allowed the discovery of several independent lineages that merit recognition at familial rank. One of these, based on seven specimens collected over more than 20 years from deep waters off New Caledonia, represents a unique, monotypic lineage closely related to Mitromorphidae, which we here name as the new family Bouchetispiridae. This new lineage bears a unique combination of teleoconch, protoconch and anatomical characters previously unknown within the Conoidea, including a translucent, fusiform shell with sculpture of strong axial ribs crossed by spiral cords, a multispiral protoconch of only 2.5 whorls with punctate sculpture, hypodermic marginal teeth and a multilayered venom bulb with two layers of muscle separated by connective tissue. This lineage may represent the sole survivor of a previously more diverse clade, or is simply one of many unique taxa that have arisen among the isolated sea mounts off New Caledonia.
Campagnes accessibles citées (9) [+] [-]AURORA 2007, BIOCAL, EBISCO, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SANTO 2006, TERRASSES
Codes des collections associés: IM (Mollusques) -
Kantor Y.I. & Puillandre N. 2012. Evolution of the radular apparatus in Conoidea (Gastropoda: Neogastropoda) as inferred from a molecular phylogeny. Malacologia 55(1): 55–90. DOI:10.4002/040.055.0105
Résumé [+] [-]The anatomy and evolution of the radular apparatus in predatory marine gastropods of the superfamily Conoidea is reconstructed on the basis of a molecular phylogeny, based on three mitochondrial genes (COI, 12S and 16S) for 102 species. A unique feeding mechanism involving use of individual marginal radular teeth at the proboscis tip for stabbing and poisoning of prey is here assumed to appear at the earliest stages of evolution of the group. The initial major evolutionary event in Conoidea was the divergence to two main branches. One is characterized by mostly hypodermic marginal teeth and absence of an odontophore, while the other possesses a radula with primarily duplex marginal teeth, a strong subradular membrane and retains a fully functional odontophore. The radular types that have previously been considered most ancestral, “prototypic” for the group (flat marginal teeth; multicuspid lateral teeth of Drilliidae; solid recurved teeth of Pseudomelatoma and Duplicaria), were found to be derived conditions. Solid recurved teeth appeared twice, independently, in Conoidea – in Pseudomelatomidae and Terebridae. The Terebridae, the sister group of Turridae, are characterized by very high radular variability, and the transformation of the marginal radular teeth within this single clade repeats the evolution of the radular apparatus across the entire Conoidea.
Campagnes accessibles citées (9) [+] [-]AURORA 2007, BOA1, EBISCO, MUSORSTOM 4, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SANTO 2006
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Puillandre N., Rivasseau A. & Bouchet P. 2012. Neither a buccinid nor a turrid: a new family of deep-sea snails for Belomitra P. Fischer, 1883 (Mollusca, Neogastropoda) with a review of recent Indo-Pacific species. Zootaxa 3496: 1-64
Résumé [+] [-]The new family Belomitridae is established for the deep-water buccinoid genus Belomitra P. Fischer, 1883, based on morphological (shell and radulae) and molecular evidence. The rachiglossate radula is uniquely characterized by a multicuspid rachidian and lateral teeth with very long narrow bases and two small cusps closer to tip. Molecular analysis of a reduced set of Buccinoidea did not resolve the group as a clade, but shows that Belomitridae forms a well supported clade within Buccinoidea. Species of Belomitra have adult sizes in the 7-53 mm range; they live in deep water, mostly in the 500-2,000 meters range, at low and mid latitudes. Eleven valid species described from the Indo-Pacific were originally named in the families Buccinidae, Columbellidae, Cancellariidae, Volutidae, and Turridae. Fourteen new species are described: Belomitra nesiotica n. sp. (Society Islands to Tonga and Fiji in 580-830 m), B. bouteti n. sp. (Society and Tuamotu Islands in 430-830 m), B. subula n. sp. (Solomon Islands to Vanuatu in 760-1110 m), B. caudata n. sp. (Sulu Sea in 2300 m), B. gymnobela n. sp. (South Pacific, eastern Indonesia and Philippines in 780-2040 m), B. hypsomitra n. sp. (Fiji in 392-407 m), B. brachymitra n. sp. (Fiji in 395-540 m), B. comitas n. sp. (Madagascar and Philippines in 1075-1110 m), B. minutula (Coral Sea in 490 m), B. granulata n. sp. (New Caledonia in 105-860 m), B. reticulata n. sp. (Tonga and Fiji to New Caledonia in 395-656 m), B. decapitata n. sp. (Indian Ocean and New Caledonia in 3680-4400 m), B. admete n. sp. (off Sri Lanka in 2540 m), and B. radula n. sp. (Madagascar in 367-488 m).
Campagnes accessibles citées (38) [+] [-]AURORA 2007, BATHUS 1, BATHUS 2, BATHUS 3, BENTHAUS, BIOCAL, BIOGEOCAL, BOA0, BORDAU 1, BORDAU 2, CONCALIS, EBISCO, KARUBAR, LAGON, MAINBAZA, MD20 (SAFARI), MD28 (SAFARI II), MIRIKY, MUSORSTOM 10, MUSORSTOM 4, MUSORSTOM 5, MUSORSTOM 6, MUSORSTOM 7, MUSORSTOM 9, NORFOLK 1, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 1, SALOMON 2, SALOMONBOA 3, SANTO 2006, SMIB 3, SMIB 4, SMIB 8, TARASOC, TERRASSES, VAUBAN 1978-1979
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Puillandre N., Fraussen K., Fedosov A. & Bouchet P. 2013. Deep-water Buccinidae (Gastropoda: Neogastropoda) from sunken wood, vents and seeps: molecular phylogeny and taxonomy. Journal of the Marine Biological Association of the United Kingdom 93(08): 2177-2195. DOI:10.1017/S0025315413000672
Résumé [+] [-]Buccinidae—like other canivorous and predatory molluscs—are generally considered to be occasional visitors or rare colonizers in deep-sea biogenic habitats. However, casual observations during tropical deep-sea cruises suggest that associations between buccinids and sunken wood, in particular, are not fortuitous. Enigmatocolus monnieri has been found to co-occur in Madagascar with bathymodiolines, vesicomyids and solemyids, indicating the presence of seeps, and species of Thermosipho gen. Nov. Have been sampled by submersibles and remotely operated vehicles, exclusively from hydrothermal vents. A molecular phylogeny (based on CO1, 12S and 28S genes) reveals that buccinid genera potentially associated with sunken wood (Eosipho, Gaillea gen. Nov., Calagrassor gen. Nov., and Manaria) are closely related to taxa from vents (Thermosipho gen. Nov.) and seeps (Enigmaticolus). The anatomy of several dissected species did not reveal any special trait that could be interpreted as a special adaptation to biogenic substrates. Buccinids from sunken wood are most diverse in the Indo-Pacific centre of marine biodiversity, the ‘Coral Triangle’, at depths between 100 and 1000 m, with numerous species still undescribed.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Lozouet P., Puillandre N. & Bouchet P. 2014. Lost and found: The Eocene family Pyramimitridae (Neogastropoda) discovered in the Recent fauna of the Indo-Pacific. Zootaxa 3754(3): 239-276. DOI:10.11646/zootaxa.3754.3.2
Résumé [+] [-]Most neogastropod families have a continuous record from the Cretaceous or Paleogene to the Recent. However, the fossil record also contains a number of obscure nominal families with unusual shell characters that are not adequately placed in the current classification. Some of these are traditionally regarded as valid, and some have been “lost” in synonymy. One such “lost” family is the Pyramimitridae, established by Cossmann in 1901 for the Eocene genus Pyramimitra, and currently included in the synonymy of Buccinidae. Examination of several species of inconspicuous, small turriform gastropods has revealed a radula type so far unknown in Neogastropoda, and their shell characters identify them as members of the "extinct" family Pyramimitridae. Neither the radular morphology nor the anatomy reveal the relationships of this enigmatic, “living fossil” family. Molecular data (12S, 16S, 28S, COI) confirm the recognition of Pyramimitridae as a distinct family, but no sister group was identified in the analysis. The family Pyramimitridae Cossmann, 1901, is thus restored as a valid family of Neogastropoda that includes the genera Pyramimitra Conrad, 1865, Endiatoma Cossmann, 1896, Vaughanites Woodring, 1928, Hortia Lozouet, 1999, and Teremitra new genus. Pyramimitrids occur in the Recent fauna at bathyal depths of the Indo- Pacific from Taiwan to Madagascar and New Zealand, with three genera and nine species (all but one new).
Campagnes accessibles citées (12) [+] [-]ATIMO VATAE, BIOCAL, BIOGEOCAL, BIOPAPUA, EXBODI, MUSORSTOM 8, NORFOLK 2, PANGLAO 2005, SALOMON 1, SANTO 2006, TAIWAN 2004, TERRASSES
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Fedosov A.E., Puillandre N. & Bouchet P. 2016. Integrative taxonomy approach to Indo-Pacific Olividae: new species revealed by molecular and morphological data. Ruthenica 26(2): 123-143
Résumé [+] [-]Five new species of Olivoidea are described based on molecular and morphological evidence: four shallow subtidal Ancilla from Madagascar and Papua New Guinea, and one deep water (500-600 m) Calyptoliva from the Tuamotus. The sympatric – but not syntopic - Ancilla morrisoni and A. kaviengensis, from New Ireland province, are morphologically cryptic, differing mostly in shell colour, but are molecularly distinct. The sympatric – and possibly syntopic – Ancilla atimovatae and A. lhaumeti, belong to a species flock from southernmost Madagascar; A. atimovatae is conchologically nearly indistinguishable from A. ventricosa, but differs markedly in radular morphology. Calyptoliva was previously known only from the Coral Sea; C. bbugae is the first representative of the genus to yield molecular data. The new Ancilla are described based on sequenced holotypes; the type material of the new Calyptoliva includes a sequenced paratype.
Campagnes accessibles citées (9) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Stahlschmidt P., Aznar-cormano L., Bouchet P. & Puillandre N. 2017. Too familiar to be questioned? Revisiting the Crassispira cerithina species complex (Gastropoda: Conoidea: Pseudomelatomidae). Journal of Molluscan Studies 83(1): 43-55. DOI:10.1093/mollus/eyw036
Campagnes accessibles citées (4) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I. & Puillandre N. 2021. Rare, deep-water and similar: revision of Sibogasyrinx (Conoidea: Cochlespiridae). European Journal of Taxonomy 773: 19-60. DOI:10.5852/ejt.2021.773.1509
Résumé [+] [-]The genus Sibogasyrinx has to date included only four species of rare deep-water Conoidea, each known from few specimens. In shell characters it strongly resembles three distantly-related genera, two of which, Comitas and Leucosyrinx, belong to a different family, the Pseudomelatomidae. A molecular phylogenetic analysis of a large amount of material of Conoidea has revealed the existence of much additional undescribed diversity within Sibogasyrinx from the central Indo-Pacific and temperate Northern Pacific. Based on partial sequences of the mitochondrial cox1 gene and morphological characters of 54 specimens, 10 species hypotheses are proposed, of which six are described as new species: S. subula sp. nov., S. lolae sp. nov., S. maximei sp. nov., S. clausura sp. nov., S. pagodiformis sp. nov. and S. elbakyanae Kantor, Puillandre & Bouchet sp. nov. One of the previously described species was absent in our material. Most of the new species are very similar and are compared to Leucosyrinx spp. Species of Sibogasyrinx are unique among Conoidea on account of the high intrageneric variability in radular morphology. Three distinct radula types are found within Sibogasyrinx, two of which are confined to highly supported subclades.
Campagnes accessibles citées (16) [+] [-]AURORA 2007, BIOPAPUA, BOA1, EBISCO, EXBODI, GUYANE 2014, KANADEEP, KAVIENG 2014, MADEEP, MIRIKY, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, SANTO 2006, TERRASSES
Codes des collections associés: IM (Mollusques) -
Lee H., Chen W.J., Puillandre N., Aznar-cormano L., Tsai M.H. & Samadi S. 2019. Incorporation of deep-sea and small-sized species provides new insights into gastropods phylogeny. Molecular Phylogenetics and Evolution 135: 136-147. DOI:10.1016/j.ympev.2019.03.003
Résumé [+] [-]The use of phylogeny with uneven or limited taxon sampling may bias our interpretation of organismal evolution, for instance, the origin(s) of the deep-sea animals. The Mollusca is the second most speciose phylum, in which the Gastropoda forms the largest group. However, the currently proposed hypotheses of gastropod phylogeny are mainly based on part of their taxonomic diversity, notably on the large-sized and shallow-water species. In this study, we aimed at correcting this bias by reconstructing the phylogeny with new mitogenomes of deep-sea gastropods including Anatoma sp., Bathysciadiidae sp., Bayerotrochus teramachii, Calliotropis micraulax, Coccocrater sp., Cocculina subcompressa, Lepetodrilus guaymasensis, Peltospira smaragdina, Perotrochus caledonicus, Pseudococculinidae sp., and Shinkailepas briandi. This dataset provided the first reports of the mitogenomes for the Cocculiniformia, three vetigastropod superfamilies: Pleurotomarioidea, Lepetelloidea, and Scissurelloidea, and the neritimorph family Phenacolepadidae. The addition of deep-sea representatives also allowed us to evaluate the evolution of habitat use in gastropods. Our results showed a strongly supported sister-group relationship between the deep-sea lineages Cocculiniformia and Neomphalina. Within the Vetigastropoda, the Pleurotomarioidea was revealed as the sister-group of the remaining vetigastropods. Although this clade was presently restricted to the deep sea, fossil records showed that it has only recently invaded this habitat, thus suggesting that shallow waters was the ancestral habitat for the Vetigastropoda. The deep-sea Lepetelloidea and Lepetodriloidea formed a well-supported clade, with the Scissurelloidea sister to it, suggesting an early transition from shallow water to deep sea in this lineage. In addition, the switch between different chemosynthetic habitats was also observed in deep-sea gastropod lineages, notably in Neomphalina and Lepetelloidea. In both cases, the biogenic substrates appeared as the putative ancestral habitat, confirming the previously proposed hypothesis of a wooden-step to deep-sea vents scenario of evolution of habitat use for these taxa.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Lorenz F. & Puillandre N. 2015. Conus hughmorrisoni, a new species of cone snail from New Ireland, Papua New Guinea (Gastropoda: Conidae). European Journal of Taxonomy 129: 1-15. DOI:10.5852/ejt.2015.129
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Marshall B.A., Puillandre N., Lambourdiere J., Couloux A. & Samadi S. 2016. Deep-sea wood-eating limpets of the genus Pectinodonta Dall, 1882 (Mollusca: Gastropoda: Patellogastropoda: Pectinodontidae) from the tropical West Pacific, in Héros V., Strong E.E. & Bouchet P.(Eds), Tropical Deep-Sea Benthos 29. Mémoires du Muséum national d’Histoire naturelle 208. Muséum national d'Histoire naturelle, Paris:235-265, ISBN:978-2-85653-774-9
Campagnes accessibles citées (9) [+] [-]
Codes des collections associés: IM (Mollusques) -
Modica M.V., Puillandre N., Castelin M., Zhang Y. & Holford M. 2014. A Good Compromise: Rapid and Robust Species Proxies for Inventorying Biodiversity Hotspots Using the Terebridae (Gastropoda: Conoidea), in Kolokotronis S.O.(Ed.), PLoS ONE 9(7): e102160. DOI:10.1371/journal.pone.0102160
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Modica M.V., Gorson J., Fedosov A.E., Malcolm G., Terryn Y., Puillandre N. & Holford M. 2020. Macroevolutionary Analyses Suggest That Environmental Factors, Not Venom Apparatus, Play Key Role in Terebridae Marine Snail Diversification, in Serb J.(Ed.), Systematic Biology 69(3): 413-430. DOI:10.1093/sysbio/syz059
Résumé [+] [-]Abstract How species diversification occurs remains an unanswered question in predatory marine invertebrates, such as sea snails of the family Terebridae. However, the anatomical disparity found throughput the Terebridae provides a unique perspective for investigating diversification patterns in venomous predators. In this study, a new dated molecular phylogeny of the Terebridae is used as a framework for investigating diversification of the family through time, and for testing the putative role of intrinsic and extrinsic traits, such as shell size, larval ecology, bathymetric distribution, and anatomical features of the venom apparatus, as drivers of terebrid species diversification. Macroevolutionary analysis revealed that when diversification rates do not vary across Terebridae clades, the whole family has been increasing its global diversification rate since 25 Ma. We recovered evidence for a concurrent increase in diversification of depth ranges, while shell size appeared to have undergone a fast divergence early in terebrid evolutionary history. Our data also confirm that planktotrophy is the ancestral larval ecology in terebrids, and evolutionary modeling highlighted that shell size is linked to larval ecology of the Terebridae, with species with long-living pelagic larvae tending to be larger and have a broader size range than lecithotrophic species. Although we recovered patterns of size and depth trait diversification through time and across clades, the presence or absence of a venom gland (VG) did not appear to have impacted Terebridae diversification. Terebrids have lost their venom apparatus several times and we confirm that the loss of a VG happened in phylogenetically clustered terminal taxa and that reversal is extremely unlikely. Our findings suggest that environmental factors, and not venom, have had more influence on terebrid evolution.
Campagnes accessibles citées (14) [+] [-]ATIMO VATAE, EXBODI, INHACA 2011, KARUBENTHOS 2, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, NanHai 2014, PANGLAO 2005, SALOMON 2, SANTO 2006, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Monnier E., Tenerio M.J., Bouchet P. & Puillandre N. 2018. The cones (Gastropoda) from Madagascar “Deep South”: composition, endemism and new taxa. Xenophora Taxonomy 19: 25-75
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Phuong M.A., Alfaro M.E., Mahardika G.N., Marwoto R.M., Prabowo R.E., Von rintelen T., Vogt P.W.H., Hendricks J.R. & Puillandre N. 2019. Lack of Signal for the Impact of Conotoxin Gene Diversity on Speciation Rates in Cone Snails, in Serb J.(Ed.), Systematic Biology 68(5): 781-796. DOI:10.1093/sysbio/syz016
Résumé [+] [-]Abstract Understanding why some groups of organisms are more diverse than others is a central goal in macroevolution. Evolvability, or the intrinsic capacity of lineages for evolutionary change, is thought to influence disparities in species diversity across taxa. Over macroevolutionary time scales, clades that exhibit high evolvability are expected to have higher speciation rates. Cone snails (family: Conidae, $>$900 spp.) provide a unique opportunity to test this prediction because their toxin genes can be used to characterize differences in evolvability between clades. Cone snails are carnivorous, use prey-specific venom (conotoxins) to capture prey, and the genes that encode venom are known and diversify through gene duplication. Theory predicts that higher gene diversity confers a greater potential to generate novel phenotypes for specialization and adaptation. Therefore, if conotoxin gene diversity gives rise to varying levels of evolvability, conotoxin gene diversity should be coupled with macroevolutionary speciation rates. We applied exon capture techniques to recover phylogenetic markers and conotoxin loci across 314 species, the largest venom discovery effort in a single study. We paired a reconstructed timetree using 12 fossil calibrations with species-specific estimates of conotoxin gene diversity and used trait-dependent diversification methods to test the impact of evolvability on diversification patterns. Surprisingly, we did not detect any signal for the relationship between conotoxin gene diversity and speciation rates, suggesting that venom evolution may not be the rate-limiting factor controlling diversification dynamics in Conidae. Comparative analyses showed some signal for the impact of diet and larval dispersal strategy on diversification patterns, though detection of a signal depended on the dataset and the method. If our results remain true with increased taxonomic sampling in future studies, they suggest that the rapid evolution of conid venom may cause other factors to become more critical to diversification, such as ecological opportunity or traits that promote isolation among lineages.
Campagnes accessibles citées (23) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CONCALIS, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PAKAIHI I TE MOANA, PAPUA NIUGINI, SALOMONBOA 3, SANTO 2006, TAIWAN 2013, TERRASSES, Restreint
Codes des collections associés: IM (Mollusques) -
Puillandre N., Samadi S., Boisselier M.C., Sysoev A., Kantor Y.I., Cruaud C., Couloux A. & Bouchet P. 2008. Starting to unravel the toxoglossan knot: Molecular phylogeny of the “turrids” (Neogastropoda: Conoidea). Molecular Phylogenetics and Evolution 47(3): 1122-1134. DOI:10.1016/j.ympev.2007.11.007
Résumé [+] [-]The superfamily Conoidea is one of the most speciose groups of marine mollusks, with estimates of about 340 recent valid genera and subgenera, and 4000 named living species. Previous classifications were based on shell and anatomical characters, and clades and phylogenetic relationships are far from well assessed. Based on a dataset of ca. 100 terminal taxa belonging to 57 genera, information provided by fragments of one mitochondrial (COI) and three nuclear (28S, 18S and H3) genes is used to infer the first molecular phylogeny of this group. Analyses are performed on each gene independently as well as for a data matrix where all genes are concatenated, using Maximum Likelihood, Maximum Parsimony and Bayesian approaches. Several well-supported clades are defined and are only partly identifiable to currently recognized families and subfamilies. The nested sampling used in our study allows a discussion of the classification at various taxonomical levels, and several genera, subfamilies and families are found polyphyletic.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N., Baylac M., Boisselier-dubayle M.C., Cruaud C. & Samadi S. 2009. An integrative approach to species delimitation in Benthomangelia (Mollusca: Conoidea). Biological Journal of the Linnean Society 96(3): 696–708
Résumé [+] [-]DNA sequences are currently used to propose primary hypotheses of species delimitation, especially when morphological variability is difficult to assess. In an integrative taxonomy framework, these hypotheses are then compared with other characters, such as morphology or geography, to produce robust species delimitations. For this purpose, the cytochrome oxidase subunit I (COI) gene has been sequenced for almost 50 specimens of the genus Benthomangelia, a deep-sea marine gastropod genus, collected in the South-West Pacific. Five genetic groups, displaying low and high genetic distances respectively within and between groups, were defined. COI hypotheses were compared with both the results obtained with the independent nuclear 28S gene and with an elliptic Fourier analysis of the shape of the last whorl of the shell. 28S gene analysis confirmed the same well-supported groups as COI, and elliptic Fourier analysis identified several morphological characters that vary similarly to genetic variability. (C) 2009 The Linnean Society of London, Biological Journal of the Linnean Society, 2009, 96, 696-708.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N., Strong E.E., Bouchet P., Boisselier M.C., Couloux A. & Samadi S. 2009. Identifying gastropod spawn from DNA barcodes: possible but not yet practicable. Molecular Ecology Resources 9(5): 1311-1321. DOI:10.1111/j.1755-0998.2009.02576.x
Résumé [+] [-]Identifying life stages of species with complex life histories is problematic as species are often only known and/or described from a single stage. DNA barcoding has been touted as an important tool for linking life-history stages of the same species. To test the current efficacy of DNA barcodes for identifying unknown mollusk life stages, 24 marine gastropod egg capsules were collected off the Philippines in deep water and sequenced for partial fragments of the COI, 16S and 12S mitochondrial genes. Two egg capsules of known shallow-water Mediterranean species were used to calibrate the method. These sequences were compared to those available in GenBank and the Barcode of Life Database ( BOLD). Using COI sequences alone, only a single Mediterranean egg capsule was identified to species, and a single Philippine egg capsule was identified tentatively to genus; all other COI sequences recovered matches between 76% and 90% with sequences from BOLD and GenBank. Similarity-based identification using all three markers confirmed the Mediterranean specimens' identifications. A phylogenetic approach was also implemented to confirm similarity-based identifications and provide a higher-taxonomic identification when species-level identifications were not possible. Comparison of available GenBank sequences to the diversity curve of a well-sampled coral reef habitat in New Caledonia highlights the poor taxonomic coverage achieved at present in existing genetic databases, emphasizing the need to develop DNA barcoding projects for megadiverse and often taxonomically challenging groups such as mollusks, to fully realize its potential as an identification and discovery tool.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N., Samadi S., Boisselier-dubayle M.C., Cruaud C. & Bouchet P. 2009. Molecular data provide new insights on the phylogeny of the Conoidea (Neogastropoda). Nautilus 123(3): 202-210
Résumé [+] [-]The superfamily Conoidea is one of the most speciose groups of marine molluses, with almost 700 genera and 10,000 living species. Previous classifications were based on morphological and anatomical characters, but clades and phylogenetic relationships were not well assessed. Information provided by one mitochondrial (COI) and three nuclear (28S, 18S, and H3) genes were used to infer the phylogeny of this group. Data were obtained from more than 100 specimens, belonging to 54 genera, collected during recent cruises in the western Pacific (Philippines, Vanuatu, Norfolk Ridge, and Chesterfield and Solomon Islands). Analyses were performed on each gene independently as well as for a data matrix where all genes were concatenated, using several methods (ML, Parsimony, Bayesian). Some families and subfamilies among Conoidea correspond to well-supported clades uniformly recovered with all genes and all methods, but others appear to be polyphyletic. Several bathyal and abyssal genera are also shown to he polyphyletic. Our results also point out some new phylogenetic relationships at the family, subfamily, and genus levels.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N., Cruaud C. & Kantor Y.I. 2010. Cryptic species in Gemmuloborsonia (Gastropoda: Conoidea). Journal of Molluscan Studies 76(1): 11-23. DOI:10.1093/mollus/eyp042
Résumé [+] [-]During a broad molecular taxonomic and phylogenetic survey of the gastropod superfamily Conoidea, 80 specimens of several species of the genus Gemmuloborsonia were sequenced for the cytochrome c oxidase subunit I gene. The genus, originally established for fossil species from the Plio-Pleistocene of the Philippines, now includes living species from bathyal depths of the Indo-Pacific Oceans. The molecular data demonstrated the presence of five separate entities, while only four ‘morphospecies’ could be isolated by visual examination. The two largest groups, representing separate species from the molecular data, were impossible to distinguish with certainty using shell or anatomical characters. To examine shell morphology in more detail the shape of the last whorl was analysed by Fourier analysis, and the Fourier coordinates were used in canonical variate analysis. The majority of the specimens were separated into two groups, but 21.6% of the specimens were impossible to distinguish by morphological characters. One of these two forms was attributed to the known species Gemmuloborsonia moosai Sysoev & Bouchet, 1996, while the other is described as a new species Gemmuloborsonia clandestina. Bathytoma colorata Sysoev & Bouchet, 2001 is transferred to Gemmuloborsonia on the basis of molecular analysis and radular morphology. Another species, represented in our material by a single specimen, remains undescribed.
Campagnes accessibles citées (8) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N., Sysoev A.V., Olivera B.M., Couloux A. & Bouchet P. 2010. Loss of planktotrophy and speciation: geographical fragmentation in the deep-water gastropod genus Bathytoma (Gastropoda, Conoidea) in the western Pacific. Systematics and Biodiversity 8(3): 371-394. DOI:10.1080/14772001003748709
Résumé [+] [-]Dispersal capabilities are crucial in how speciation patterns are determined in marine invertebrates. Species possessing a long-living planktonic larva apparently have a dispersal advantage over those with non-planktotrophic development, and their distant populations may exchange genetic material, maintaining a broad geographical range for the species. Recent species of the gastropod genus Bathytoma (Conoidea) are all characterized by non-planktotrophic development, having most probably lost a free-swimming larva in the pre-Pliocene, as Miocene fossils have protoconchs indicating planktotrophic larval development. All have a bathyal distribution (100–1500 m), which implies that their capability for direct expansion on the bottom is restricted by both deep-sea basins and shallow-water areas, especially in insular West and South-West Indo-Pacific. Therefore, it can be hypothesized that Bathytoma populations should represent numerous, mostly allopatric taxa restricted to a single or contiguous island groups. We tested this hypothesis using molecular and morphological characters independently. One hundred and thirty-eight specimens from the Philippines, Solomons, Vanuatu, and the Coral Sea were sequenced for one mitochondrial (COI) and one nuclear (ITS2) gene, and 14 operational molecular units were recognized. When these molecular units are overlaid over shell characters, 13 species (11 unnamed) and one form of uncertain status are recognized: three occur in the Philippines, six in the Solomons and one in New Caledonia. Broad distributions (inter-archipelagic) are uncommon (three species). On the whole, the phylogeographic pattern of the diversity in the genus is rather complex and probably also reflects processes of sympatric and fine-scale allopatric speciation, and local extinctions. The eleven new species are described and named.
Campagnes accessibles citées (17) [+] [-]AURORA 2007, BATHUS 1, BOA1, EBISCO, HALIPRO 1, KARUBAR, MUSORSTOM 2, MUSORSTOM 3, MUSORSTOM 6, MUSORSTOM 7, PANGLAO 2004, PANGLAO 2005, SALOMON 1, SALOMON 2, SALOMONBOA 3, SANTO 2006, SMIB 2
Codes des collections associés: IM (Mollusques) -
Puillandre N., Macpherson E., Lambourdière J., Cruaud C., Boisselier-dubayle M.C. & Samadi S. 2011. Barcoding type specimens helps to identify synonyms and an unnamed new species in Eumunida Smith, 1883 (Decapoda: Eumunididae). Invertebrate Systematics 25(4): 322-333. DOI:10.1071/IS11022
Résumé [+] [-]The primary purpose of DNA-barcoding projects is to generate an efficient expertise and identification tool. This is an important challenge to the taxonomy of the 21st century, as the demand increases and the expert capacity does not. However, identifying specimens using DNA-barcodes requires a preliminary analysis to relate molecular clusters to available scientific names. Through a case study of the genus Eumunida (Decapoda : Eumunididae), we illustrate how naming molecule-based units, and thus providing an accurate DNA-based identification tool, is facilitated by sequencing type specimens. Using both morphological and unlinked molecular markers (COI and 28S genes), we analysed 230 specimens from 12 geographic areas, covering two-thirds of the known diversity of the genus, including type specimens of 13 species. Most hypotheses of species delimitation are validated, as they correspond to molecular units linked to only one taxonomic name (and vice versa). However, a putative cryptic species is also revealed and three entities previously named as distinct species may in fact belong to a single one, and thus need to be synonymised. Our analyses, which integrate the current naming rules, enhance the a-taxonomy of the genus and provide an effective identification tool based on DNA-barcodes. They illustrate the ability of DNA-barcodes, especially when type specimens are included, to pinpoint where a taxonomic revision is needed.
Campagnes accessibles citées (11) [+] [-]BIOCAL, CHALCAL 1, KARUBAR, LITHIST, MUSORSTOM 4, MUSORSTOM 6, MUSORSTOM 7, NORFOLK 1, NORFOLK 2, SALOMON 1, SMCB
Codes des collections associés: IU (Crustacés) -
Puillandre N., Meyer C.P., Bouchet P. & Olivera B.M. 2011. Genetic divergence and geographical variation in the deep-water Conus orbignyi complex (Mollusca: Conoidea): Diversity in the Conus orbignyi complex. Zoologica Scripta 40(4): 350-363. DOI:10.1111/j.1463-6409.2011.00478.x
Résumé [+] [-]The cone snails (family Conidae) are a hyperdiverse lineage of venomous gastropods. Two standard markers, COI and ITS2, were used to define six genetically divergent groups within a subclade of Conidae that includes Conus orbignyi; each of these was then evaluated based on their shell morphology. We conclude that three forms, previously regarded as subspecies of C. orbignyi are distinct species, now recognized as C. orbignyi, C. elokismenos and C. coriolisi. In addition, three additional species (C. pseudorbignyi, C. joliveti and C. comatosa) belong to this clade. Some of the proposed species (e. g. C. elokismenos) are possibly in turn complexes comprising multiple species. Groups such as Conidae illustrate the challenges generally faced in species delimitation in biodiverse lineages. In the case of C. orbignyi complex, they are not only definable, genetically divergent lineages, but also considerable geographical variation within each group. Our study suggests that an intensive analysis of multiple specimens within a single locality helps to minimize the confounding effects of geographical variation and can be a useful starting point for circumscribing different species within such a confusing complex.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N., Kantor Y.I., Sysoev A.V., Couloux A., Meyer C.P., Rawlings T., Todd J.A. & Bouchet P. 2011. The dragon tamed? A molecular phylogeny of the Conoidea (Gastropoda). Journal of Molluscan Studies 77(3): 259-272. DOI:10.1093/mollus/eyr015
Résumé [+] [-]The superfamily Conoidea constitutes one of the most diverse and taxonomically challenging groups among marine molluscs. Classifications based on shell or radular characters are highly contradictory and disputed. Whereas the monophyly of the Conidae and Terebridae has not been challenged, the other constituents of the superfamily are placed in a 'trash' group, the turrids, the non-monophyly of which has been demonstrated by anatomical and molecular evidence. We present here a new molecular phylogeny based on a total of 102 conoidean genera (87 'turrids', 5 cones and 10 terebrids) and three mitochondrial genes [cytochrome oxidase I (COI), 12S rRNA and 16S rRNA]. The resulting tree recognizes 14 clades. When the Conidae (Conus s.l.) and Terebridae are ranked as families for consistency of usage, the 'turrids' must be split into 12 families of comparable rank. A new genus-level classification of the Conoidea is published in an accompanying paper.
Campagnes accessibles citées (9) [+] [-]AURORA 2007, BOA1, EBISCO, MUSORSTOM 4, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SANTO 2006
Codes des collections associés: IM (Mollusques) -
Puillandre N., Modica M.V., Zhan Y., Sirovich L., Boisselier M.C., Cruaud C., Holford M. & Samadi S. 2012. Large-scale species delimitation method for hyperdiverse groups: LARGE-SCALE SPECIES DELIMITATION. Molecular Ecology 21(11): 2671-2691. DOI:10.1111/j.1365-294X.2012.05559.x
Résumé [+] [-]Accelerating the description of biodiversity is a major challenge as extinction rates increase. Integrative taxonomy combining molecular, morphological, ecological and geographical data is seen as the best route to reliably identify species. Classic molluscan taxonomic methodology proposes primary species hypotheses (PSHs) based on shell morphology. However, in hyperdiverse groups, such as the molluscan family Turridae, where most of the species remain unknown and for which homoplasy and plasticity of morphological characters is common, shell-based PSHs can be arduous. A four-pronged approach was employed to generate robust species hypotheses of a 1000 specimen South-West Pacific Turridae data set in which: (i) analysis of COI DNA Barcode gene is coupled with (ii) species delimitation tools GMYC (General Mixed Yule Coalescence Method) and ABGD (Automatic Barcode Gap Discovery) to propose PSHs that are then (iii) visualized using Klee diagrams and (iv) evaluated with additional evidence, such as nuclear gene rRNA 28S, morphological characters, geographical and bathymetrical distribution to determine conclusive secondary species hypotheses (SSHs). The integrative taxonomy approach applied identified 87 Turridae species, more than doubling the amount previously known in the Gemmula genus. In contrast to a predominantly shell-based morphological approach, which over the last 30 years proposed only 13 new species names for the Turridae genus Gemmula, the integrative approach described here identified 27 novel species hypotheses not linked to available species names in the literature. The formalized strategy applied here outlines an effective and reproducible protocol for large-scale species delimitation of hyperdiverse groups.
Campagnes accessibles citées (9) [+] [-]AURORA 2007, BOA1, EBISCO, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SALOMONBOA 3, TAIWAN 2004
Codes des collections associés: IM (Mollusques) -
Puillandre N., Bouchet P., Duda T., Kauferstein S., Kohn A., Olivera B.M., Watkins M. & Meyer C. 2014. Molecular phylogeny and evolution of the cone snails (Gastropoda, Conoidea). Molecular Phylogenetics and Evolution 78: 290-303. DOI:10.1016/j.ympev.2014.05.023
Résumé [+] [-]We present a large-scale molecular phylogeny that includes 320 of the 761 recognized valid species of the cone snails (Conus), one of the most diverse groups of marine molluscs, based on three mitochondrial genes (COI, 16S rDNA and 12S rDNA). This is the first phylogeny of the taxon to employ concatenated sequences of several genes, and it includes more than twice as many species as the last published molecular phylogeny of the entire group nearly a decade ago. Most of the numerous molecular phylogenies published during the last 15 years are limited to rather small fractions of its species diversity. Bayesian and maximum likelihood analyses are mostly congruent and confirm the presence of three previously reported highly divergent lineages among cone snails, and one identified here using molecular data. About 85% of the species cluster in the single Large Major Clade; the others are divided between the Small Major Clade (12%), the Conus californicus lineage (one species), and a newly defined clade (3%). We also define several subclades within the Large and Small major clades, but most of their relationships remain poorly supported. To illustrate the usefulness of molecular phylogenies in addressing specific evolutionary questions, we analyse the evolution of the diet, the biogeography and the toxins of cone snails. All cone snails whose feeding biology is known inject venom into large prey animals and swallow them whole. Predation on polychaete worms is inferred as the ancestral state, and diet shifts to molluscs and fishes occurred rarely. The ancestor of cone snails probably originated from the Indo-Pacific; rather few colonisations of other biogeographic provinces have probably occurred. A new classification of the Conidae, based on the molecular phylogeny, is published in an accompanying paper.
Campagnes accessibles citées (14) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, BOA1, CONCALIS, EBISCO, MIRIKY, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SALOMONBOA 3, SANTO 2006, TERRASSES
Codes des collections associés: IM (Mollusques) -
Puillandre N., Stöcklin R., Favreau P., Bianchi E., Perret F., Rivasseau A., Limpalaër L., Monnier E. & Bouchet P. 2014. When everything converges: Integrative taxonomy with shell, DNA and venomic data reveals Conus conco, a new species of cone snails (Gastropoda: Conoidea). Molecular Phylogenetics and Evolution 80: 186-192. DOI:10.1016/j.ympev.2014.06.024
Résumé [+] [-]Cone snails have long been studied both by taxonomists for the diversity of their shells and by biochemists for the potential therapeutic applications of their toxins. Phylogenetic approaches have revealed that different lineages of Conus evolved divergent venoms, a property that is exploited to enhance the discovery of new conotoxins, but is rarely used in taxonomy. Specimens belonging to the Indo-West Pacific Conus lividus species complex were analyzed using phenetic and phylogenetic methods based on shell morphology, COI and 28S rRNA gene sequences and venom mRNA expression and protein composition. All methods converged to reveal a new species, C. conco n. sp. (described in Supplementary data), restricted to the Marquesas Islands, where it diverged recently (_3 mya) from C. lividus. The geographical distribution of C. conco and C. lividus and their phylogenetic relationships suggest that the two species diverged in allopatry. Furthermore, the diversity of the transcript sequences and toxin molecular masses suggest that C. conco evolved unique toxins, presumably in response to new selective pressure, such as the availability of new preys and ecological niches. Furthermore, this new species evolved new transcripts giving rise to original toxin structures, probably each carrying specific biological activity.
Campagnes accessibles citées (5) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N., Fedosov A.E., Zaharias P., Aznar-cormano L. & Kantor Y.I. 2017. A quest for the lost types of Lophiotoma (Gastropoda: Conoidea: Turridae): integrative taxonomy in a nomenclatural mess. Zoological Journal of the Linnean Society 181(2): 243-271. DOI:10.1093/zoolinnean/zlx012
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Puillandre N. & Tenorio M.J. 2017. A question of rank: DNA sequences and radula characters reveal a new genus of cone snails (Gastropoda: Conidae). Journal of Molluscan Studies 83(2): 200-210. DOI:10.1093/mollus/eyx011
Campagnes accessibles citées (10) [+] [-]ATIMO VATAE, BOA1, EBISCO, KAVIENG 2014, NORFOLK 2, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SANTO 2006, TERRASSES
Codes des collections associés: IM (Mollusques) -
Samadi S., Puillandre N., Pante E., Boisselier M.C., Corbari L., Chen W.J., Maestrati P., Mana R., Thubaut J., Zuccon D. & Hourdez S. 2015. Patchiness of deep‐sea communities in Papua New Guinea and potential susceptibility to anthropogenic disturbances illustrated by seep organisms. Marine Ecology 36(S1): 109-132. DOI:10.1111/maec.12204
Résumé [+] [-]The deep-sea part of the ‘Papua Niugini Biodiversity Expedition’ surveyed the deep-sea environments along the coasts of New Guinea Island in the Bismarck Sea, from the Vitiaz Strait to the border between Papua New Guinea (PNG) and Irian Jaya. This expedition was a follow-up of the BIOPAPUA cruise (2010) that gave some of the first insights into the diversity of the deep-sea fauna of the Bismarck and Solomon Seas for environments other than deep-sea hydrothermal vents. The main aims of the cruise were to survey the diversity of the fauna of (i) hard bottoms that are typically found on deep seamounts, (ii) Astrolabe Bay from 200 m to about 1000 m, (iii) the chemosynthetic environments of the deep sea, including cold-seep environments and plant debris. Astrolabe Bay was one of our targets because its topography allows sampling over the complete bathymetric gradient covered by our sampling gear (down to 1000 m depth), and the recent start of nickel refining activities in the bay is a potential threat to its marine fauna for which little reference data are available. Sampling in the bay revealed not only a diversified fauna associated with soft bottoms and plant debris, but also a chemosynthetic fauna typical of coldseep environments (e.g. siboglinid worms and bathymodioline mussels) below the Ramu refinery. Although the refinery activities had officially started just one week before our work in the area, we observed impacts of these activities. Our molecular work indicates that the siboglinid tubeworm species and one of the two mussel species collected below the Ramu refinery have so far only been documented from this location, despite intensive sampling effort. This illustrates the potential destructive effects of human activities in areas where the diversity and uniqueness of deep-sea communities are poorly understood.
Campagnes accessibles citées (3) [+] [-]
Codes des collections associés: IA (Annélides, Polychètes et Sipunculides) -
Sanders M.T., Merle D., Bouchet P., Castelin M., Beu A.G., Samadi S. & Puillandre N. 2017. One for each ocean: revision of the Bursa granularis (Röding, 1798) species complex (Gastropoda: Tonnoidea: Bursidae). Journal of Molluscan Studies 83(4): 384-398. DOI:10.1093/mollus/eyx029
Résumé [+] [-]Bursa granularis (Röding, 1798) is a tonnoidean gastropod that is regarded as broadly distributed throughout the Indo-Pacific and tropical western Atlantic. Because of its variable shell it has received no less than thirteen names, now all synonymized under the name B. granularis. We sequenced a fragment of the cox1 gene for 82 specimens covering a large part of its distribution and most type localities. Two delimitation methods were applied, one based on genetic distance (ABGD) and one based on phylogenetic trees (GMYC). All analyses suggest that specimens identified as B. granularis comprise four distinct species: one limited to the tropical western Atlantic, another to southwestern Western Australia and two in the Indo-Pacific (from the Red Sea to the open Pacific) that are partly sympatric—but not syntopic—in Japan, the Philippines, Vanuatu and New Caledonia. Based on comparison of shell characters, we applied the following available names to the four species, respectively: B. cubaniana (d’Orbigny, 1841), B. elisabettae Nappo, Pellegrini & Bonomolo, 2014, B. granularis s. s. and B. affinis Broderip, 1833. We provide new standardized conchological descriptions for each of them. Our results demonstrate that a long planktotrophic larval stage, common among Tonnoidea, does not necessarily ensure a circumtropical species distribution.
Campagnes accessibles citées (9) [+] [-]INHACA 2011, KARUBENTHOS 2012, MAINBAZA, PAKAIHI I TE MOANA, PANGLAO 2004, PAPUA NIUGINI, SANTO 2006, TERRASSES, Restreint
Codes des collections associés: IM (Mollusques) -
Sanders M.T., Merle D. & Puillandre N. 2019. A review of fossil Bursidae and their use for phylogeny calibration. Geodiversitas 41(1): 247. DOI:10.5252/geodiversitas2019v41a5
Résumé [+] [-]Bursidae Thiele, 1925 is a moderately diverse group of extant tonnoidean gastropods with a significant fossil record. We review the fossil record of the family. We exclude some taxa from Bursidae, particularly the most ancient ones: Hanaibursa aquilana (Parona, 1909) (Aptian) and Bursa saundersi Adegoke, 1977 (Selandian). We exclude the genus Olequahia Stewart, 1926; its posterior siphonal canal is not analogous with that of Bursidae. We also discuss the possible revision of the type genus, Bursa Röding, 1798, on the basis of previously published phylogenies; the genus is not monophyletic. We create two new genera, Olssonia n. gen. (type species: Bursa chira Olsson, 1930) and Aquitanobursa n. gen. (type species: Ranella grateloupi d’Orbigny, 1852), containing only fossil species. Lectotypes are designated for Ranella grateloupi d’Orbigny, 1852, Ranella morrisi d’Archiac & Haime, 1853 and Apollon pelouatensis Cossmann & Peyrot, 1924. Based on this revision of the fossil record, we propose five fossil calibration points that can be used to date molecular phylogenetic trees of Bursidae.
Campagnes accessibles citées (3) [+] [-]
Codes des collections associés: IM (Mollusques) -
Sanders M.T., Merle D., Laurin M., Bonillo C. & Puillandre N. 2021. Raising names from the dead: A time-calibrated phylogeny of frog shells (Bursidae, Tonnoidea, Gastropoda) using mitogenomic data. Molecular Phylogenetics and Evolution 156: 107040. DOI:10.1016/j.ympev.2020.107040
Résumé [+] [-]With 59 Recent species, Bursidae, known as «frog shells», are a small but widely distributed group of tropical and subtropical gastropods that are most diverse in the Indo-West Pacific. The present study is aimed at recon structing phylogenetic relationships of bursid gastropods based on extensive and representative taxon sampling. Five genetic markers (cytochrome c oxidase subunit I (cox1), 16 s and 12 s rRNA mitochondrial genes, 28 s rRNA and Histone H3 nuclear gene) were sequenced for over 30 species in every known genus but Crossata. Furthermore, we sequenced the complete mt-genome of 9 species (10 specimens) (Aspa marginata, Marsupina bufo, Korrigania quirihorai, Korrigania fijiensis, Tutufa rubeta, Bursa lamarckii, Lampasopsis rhodostoma (twice), Bufonaria perelegans and Bursa aff. tuberosissima). Our analysis recovered Bursidae as a monophyletic group, whereas the genus Bursa was found to be polyphyletic. The genera Talisman and Dulcerana are resurrected and the genera Alanbeuella gen. nov. and Korrigania gen. nov. are described. Dating analysis using 21 extinct taxa for node and simplified tip calibrations was performed, showing a diversification of the group in two phases. Diversification may be linked to tectonic events leading to biodiversity relocation from the western Tethys to ward the Indo-Pacific.
Campagnes accessibles citées (22) [+] [-]ATIMO VATAE, CONCALIS, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, MAINBAZA, MIRIKY, NORFOLK 1, NORFOLK 2, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SANTO 2006, TERRASSES, Tuhaa Pae 2013, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Strong E.E., Puillandre N., Beu A.G., Castelin M. & Bouchet P. 2019. Frogs and tuns and tritons – A molecular phylogeny and revised family classification of the predatory gastropod superfamily Tonnoidea (Caenogastropoda). Molecular Phylogenetics and Evolution 130: 18-34. DOI:10.1016/j.ympev.2018.09.016
Résumé [+] [-]The Tonnoidea is a moderately diverse group of large, predatory gastropods with ∼360 valid species. Known for their ability to secrete sulfuric acid, they use it to prey on a diversity of invertebrates, primarily echinoderms. Tonnoideans currently are classified in seven accepted families: the comparatively well known, shallow water Bursidae, Cassidae, Personidae, Ranellidae, and Tonnidae, and the lesser-known, deep water Laubierinidae and Pisanianuridae. We assembled a mitochondrial and nuclear gene (COI, 16S, 12S, 28S) dataset for ∼80 species and 38 genera currently recognized as valid. Bayesian analysis of the concatenated dataset recovered a monophyletic Tonnoidea, with Ficus as its sister group. Unexpectedly, Thalassocyon, currently classified in the Ficidae, was nested within the ingroup as the sister group to Distorsionella. Among currently recognized families, Tonnidae, Cassidae, Bursidae and Personidae were supported as monophyletic but the Ranellidae and Ranellinae were not, with Cymatiinae, Ranella and Charonia supported as three unrelated clades. The Laubierinidae and Pisanianuridae together form a monophyletic group. Although not all currently accepted genera have been included in the analysis, the new phylogeny is sufficiently robust and stable to the inclusion/exclusion of nonconserved regions to establish a revised family-level classification with nine families: Bursidae, Cassidae, Charoniidae, Cymatiidae, Laubierinidae, Personidae, Ranellidae, Thalassocyonidae and Tonnidae. The results reveal that many genera as presently circumscribed are para- or polyphyletic and, in some cases support the rescue of several genus-group names from synonymy (Austrosassia, Austrotriton, Laminilabrum, Lampadopsis, Personella, Proxicharonia, Tritonoranella) or conversely, support their synonymization (Biplex with Gyrineum). Several species complexes are also revealed that merit further investigation (e.g., Personidae: Distorsio decipiens, D. reticularis; Bursidae: Bursa tuberosissima; Cassidae: Echinophoria wyvillei, Galeodea bituminata, and Semicassis bisulcata). Consequently, despite their teleplanic larvae, the apparently circumglobal distribution of some tonnoidean species is the result of excessive synonymy. The superfamily is estimated to have diverged during the early Jurassic (∼186 Ma), with most families originating during a narrow ∼20 My window in Albian-Aptian times as part of the Mesozoic Marine Revolution.
Campagnes accessibles citées (20) [+] [-]ATIMO VATAE, AURORA 2007, CONCALIS, EBISCO, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, MAINBAZA, MIRIKY, NORFOLK 2, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, SALOMON 2, SANTO 2006, TAIWAN 2004, TERRASSES, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Tenorio M.J., Monnier E. & Puillandre N. 2018. Notes on Afonsoconus Tucker & Tenorio, 2013 (Gastropoda, Conidae), with description of a new species from the Southwestern Indian Ocean. European Journal of Taxonomy(472). DOI:10.5852/ejt.2018.472
Résumé [+] [-]Although cone snails are among the most studied group of gastropods, new species are still regularly described. Here, we focus on Afonsoconus Tucker & Tenorio, 2013, a lineage that includes only two species from the Indo-Pacific Ocean. The analysis of molecular (partial mitochondrial cox1 gene sequences) and morphological (shell and radular tooth) characters revealed that the samples collected by dredging in deep water during a recent expedition carried out in the Mozambique Channel are different from the samples collected in the Pacific Ocean. We thus introduce here a new species, Afonsoconus crosnieri sp. nov., from the SW Indian Ocean including records from the Mozambique Channel, the Comoros and Glorieuses Islands, Madagascar, South Africa and Reunion Island.
Campagnes accessibles citées (5) [+] [-]
Codes des collections associés: IM (Mollusques) -
Thubaut J., Puillandre N., Faure B., Cruaud C. & Samadi S. 2013. The contrasted evolutionary fates of deep‐sea chemosynthetic mussels (Bivalvia, Bathymodiolinae). Ecology and Evolution 3(14): 4748-4766. DOI:10.1002/ece3.749
Résumé [+] [-]Bathymodiolinae are giant mussels that were discovered at hydrothermal vents and harboring chemosynthetic symbionts. Due to their close phylogenetic relationship with seep species and tiny mussels from organic substrates, it was hypothesized that they gradually evolved from shallow to deeper environments, and specialized in decaying organic remains, then in seeps, and finally colonized deep-sea vents. Here, we present a multigene phylogeny that reveals that most of the genera are polyphyletic and/or paraphyletic. The robustness of the phylogeny allows us to revise the genus-level classification. Organic remains are robustly supported as the ancestral habitat for Bathymodiolinae. However, rather than a single step toward colonization of vents and seeps, recurrent habitat shifts from organic substrates to vents and seeps occurred during evolution, and never the reverse. This new phylogenetic framework challenges the gradualist scenarios from shallow to deep. Mussels from organic remains tolerate a large range of ecological conditions and display a spectacular species diversity contrary to vent mussels, although such habitats are yet underexplored compared to vents and seeps. Overall, our data suggest that for deep-sea mussels, the high specialization to vent habitats provides ecological success in this harsh habitat but also brings the lineage to a kind of evolutionary dead end.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Touitou D., Puillandre N., Bouchet P. & Clovel P. 2020. Description of two new species of cone snails from the Lesser Antilles. Xenophora Taxonomy 30: 40-46. DOI:10.17600/15005400
Résumé [+] [-]Specimens in the Conus (Dauciconus) daucus (Hwass in Bruguière, 1792) complex differ by subtle differences in the colour pattern, including a yellowish to orange vs pink apex. The two forms co-occur subtidally in 5-30 m, and cluster in two distinct molecular clades. The species with yellowish to orange apex is described as Conus (Dauciconus) quasidaucus spec. nov. A sequenced neotype is designated for Conus daucus. Another cone collected in 90-95 m off Guadeloupe and resembling C. eversoni, with which had earlier been misidentified, is described as Conus (Dauciconus) karubenthos spec. nov.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Uribe J.E., Puillandre N. & Zardoya R. 2016. Beyond Conus: Phylogenetic relationships of Conidae based on complete mitochondrial genomes. Molecular Phylogenetics and Evolution 107: 142-151. DOI:10.1016/j.ympev.2016.10.008
Résumé [+] [-]Understanding how the extraordinary taxonomic and ecological diversity of cone snails (Caenogastropoda: Conidae) evolved requires a statistically robust phylogenetic framework, which thus far is not available. While recent molecular phylogenies have been able to distinguish several deep lineages within the family Conidae, including the genera Profundiconus, Californiconus, Conasprella, and Conus (and within this one, several subgenera), phylogenetic relationships among these genera remain elusive. Moreover, the possibility that additional deep lineages may exist within the family is open. Here, we reconstructed with probabilistic methods a molecular phylogeny of Conidae using the newly sequenced complete or nearly complete mitochondrial (mt) genomes of the following nine species that represent all main Conidae lineages and potentially new ones: Profundiconus teramachii, Californiconus californicus, Conasprella wakayamaensis, Lilliconus sagei, Pseudolilliconus traillii, Conus (Kalloconus) venulatus, Conus (Lautoconus) ventricosus, Conus (Lautoconus) hybridus, and Conus (Eugeniconus) nobilis. To test the monophyly of the family, we also sequenced the nearly complete mt genomes of the following three species representing closely related conoidean families: Benthomangelia sp. (Mangeliidae), Tomopleura sp. (Borsoniidae), and Glyphostoma sp. (Clathurellidae). All newly sequenced conoidean mt genomes shared a relatively constant gene order with rearrangements limited to tRNA genes. The reconstructed phylogeny recovered with high statistical support the monophyly of Conidae and phylogenetic relationships within the family. The genus Profundiconus was placed as sister to the remaining genera. Within these, a clade including Californiconus and Lilliconus + Pseudolilliconus was the sister group of Conasprella to the exclusion of Conus. The phylogeny included a new lineage whose relative phylogenetic position was unknown (Lilliconus) and uncovered thus far hidden diversity within the family (Pseudolilliconus). Moreover, reconstructed phylogenetic relationships allowed inferring that the peculiar diet of Californiconus based on worms, mollusks, crustaceans and fish is derived, and reinforce the hypothesis that the ancestor of Conidae was a worm hunter. A chronogram was reconstructed under an uncorrelated relaxed molecular clock, which dated the origin of the family shortly after the Cretaceous-Tertiary boundary (about 59 million years ago) and the divergence among main lineages during the Paleocene and the Eocene (56–30 million years ago).
Campagnes accessibles citées (3) [+] [-]
Codes des collections associés: IM (Mollusques) -
Zaharias P., Pante E., Gey D., Fedosov A.E. & Puillandre N. 2020. Data, time and money: evaluating the best compromise for inferring molecular phylogenies of non-model animal taxa. Molecular Phylogenetics and Evolution 142: 106660. DOI:10.1016/j.ympev.2019.106660
Résumé [+] [-]For over a decade now, High Throughput sequencing (HTS) approaches have revolutionized phylogenetics, both in terms of data production and methodology. While transcriptomes and (reduced) genomes are increasingly used, generating and analyzing HTS datasets remain expensive, time consuming and complex for most nonmodel taxa. Indeed, a literature survey revealed that 74% of the molecular phylogenetics trees published in 2018 are based on data obtained through Sanger sequencing. In this context, our goal was to identify the strategy that would represent the best compromise among costs, time and robustness of the resulting tree. We sequenced and assembled 32 transcriptomes of the marine mollusk family Turridae, considered as a typical non-model animal taxon. From these data, we extracted the loci most commonly used in gastropod phylogenies (cox1, 12S, 16S, 28S, h3 and 18S), full mitogenomes, and a reduced nuclear transcriptome representation. With each dataset, we reconstructed phylogenies and compared their robustness and accuracy. We discuss the impact of missing data and the use of statistical tests, tree metrics, and supertree and supermatrix methods to further improve phylogenetic data acquisition pipelines. We evaluated the overall costs (time and money) in order to identify the best compromise for phylogenetic data sampling in non-model animal taxa. Although sequencing full mitogenomes seems to constitute the best compromise both in terms of costs and node support, they are known to induce biases in phylogenetic reconstructions. Rather, we recommend to systematically include loci commonly used for phylogenetics and taxonomy (i.e. DNA barcodes, rRNA genes, full mitogenomes, etc.) among the other loci when designing baits for capture.
Campagnes accessibles citées (2) [+] [-]
Codes des collections associés: IM (Mollusques) -
Zaharias P., Kantor Y.I., Fedosov A.E., Criscione F., Hallan A., Kano Y., Bardin J. & Puillandre N. 2020. Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma). Zoological Journal of the Linnean Society 190(2): 532-557. DOI:10.1093/zoolinnean/zlaa010
Résumé [+] [-]Abstract The practice of species delimitation using molecular data commonly leads to the revealing of species complexes and an increase in the number of delimited species. In a few instances, however, DNA-based taxonomy has led to lumping together of previously described species. Here, we delimit species in the genus Cryptogemma (Gastropoda: Conoidea: Turridae), a group of deep-sea snails with a wide geographical distribution, primarily by using the mitochondrial COI gene. Three approaches of species delimitation (ABGD, mPTP and GMYC) were applied to define species partitions. All approaches resulted in eight species. According to previous taxonomic studies and shell morphology, 23 available names potentially apply to the eight Cryptogemma species that were recognized herein. Shell morphometrics, radular characters and geographical and bathymetric distributions were used to link type specimens to these delimited species. In all, 23 of these available names are here attributed to seven species, resulting in 16 synonymizations, and one species is described as new: Cryptogemma powelli sp. nov. We discuss the possible reasons underlying the apparent overdescription of species within Cryptogemma, which is shown here to constitute a rare case of DNA-based species lumping in the hyper-diversified superfamily Conoidea.
Campagnes accessibles citées (25) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, CONCALIS, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, KANACONO, KANADEEP, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PANGLAO 2004, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TAIWAN 2013, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques)