Fiche participant :
Nom : Rouse
Prénom : Greg
Liste des participations aux campagnes accessibles
- PAPUA NIUGINI
- Shore-based sampling (Mon Nov 05 00:00:00 CET 2012 - Fri Dec 14 00:00:00 CET 2012)
- ( Scripps Institution of Oceanography, UC San Diego)
Bibliographie (5) [+] [-]
Exporter les bibliographies
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Mongiardino koch N., Thompson J.R., Hiley A.S., Mccowin M.F., Armstrong A.F., Coppard S.E., Aguilera F., Bronstein O., Kroh A., Mooi R. & Rouse G.W. 2022. Phylogenomic analyses of echinoid diversification prompt a re-evaluation of their fossil record. eLife 11: e72460. DOI:10.7554/eLife.72460
Résumé [+] [-]Echinoids are key components of modern marine ecosystems. Despite a remarkable fossil record, the emergence of their crown group is documented by few specimens of unclear affinities, rendering their early history uncertain. The origin of sand dollars, one of its most distinctive clades, is also unclear due to an unstable phylogenetic context. We employ 18 novel genomes and transcriptomes to build a phylogenomic dataset with a near-complete sampling of major lineages. With it, we revise the phylogeny and divergence times of echinoids, and place their history within the broader context of echinoderm evolution. We also introduce the concept of a chronospace – a multidimensional representation of node ages – and use it to explore methodological decisions involved in time calibrating phylogenies. We find the choice of clock model to have the strongest impact on divergence times, while the use of site-heterogeneous models and alternative node prior distributions show minimal effects. The choice of loci has an intermediate impact, affecting mostly deep Paleozoic nodes, for which clock-like genes recover dates more congruent with fossil evidence. Our results reveal that crown group echinoids originated in the Permian and diversified rapidly in the Triassic, despite the relative lack of fossil evidence for this early diversification. We also clarify the relationships between sand dollars and their close relatives and confidently date their origins to the Cretaceous, implying ghost ranges spanning approximately 50 million years, a remarkable discrepancy with their rich fossil record.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IE (Échinodermes) -
Rouse G.W., Jermiin L.S., Wilson N.G., Eeckhaut I., Lanterbecq D., Oji T., Young C.M., Browning T., Cisternas P., Helgen L.E., Stuckey M. & Messing C.G. 2013. Fixed, free, and fixed: The fickle phylogeny of extant Crinoidea (Echinodermata) and their Permian–Triassic origin. Molecular Phylogenetics and Evolution 66(1): 161-181. DOI:10.1016/j.ympev.2012.09.018
Résumé [+] [-]Although the status of Crinoidea (sea lilies and featherstars) as sister group to all other living echinoderms is well-established, relationships among crinoids, particularly extant forms, are debated. All living species are currently placed in Articulata, which is generally accepted as the only crinoid group to survive the Permian–Triassic extinction event. Recent classifications have recognized five major extant taxa: Isocrinida, Hyocrinida, Bourgueticrinina, Comatulidina and Cyrtocrinida, plus several smaller groups with uncertain taxonomic status, e.g., Guillecrinus, Proisocrinus and Caledonicrinus. Here we infer the phylogeny of extant Crinoidea using three mitochondrial genes and two nuclear genes from 59 crinoid terminals that span the majority of extant crinoid diversity. Although there is poor support for some of the more basal nodes, and some tree topologies varied with the data used and mode of analysis, we obtain several robust results. Cyrtocrinida, Hyocrinida, Isocrinida are all recovered as clades, but two stalked crinoid groups, Bourgueticrinina and Guillecrinina, nest among the featherstars, lending support to an argument that they are paedomorphic forms. Hence, they are reduced to families within Comatulida. Proisocrinus is clearly shown to be part of Isocrinida, and Caledonicrinus may not be a bourgueticrinid. Among comatulids, tree topologies show little congruence with current taxonomy, indicating that much systematic revision is required. Relaxed molecular clock analyses with eight fossil calibration points recover Articulata with a median date to the most recent common ancestor at 231–252 mya in the Middle to Upper Triassic. These analyses tend to support the hypothesis that the group is a radiation from a small clade that passed through the Permian–Triassic extinction event rather than several lineages that survived. Our tree topologies show various scenarios for the evolution of stalks and cirri in Articulata, so it is clear that further data and taxon sampling are needed to recover a more robust phylogeny of the group.
Campagnes accessibles citées (3) [+] [-]
Codes des collections associés: IE (Échinodermes) -
Rouse G.W., Lanterbecq D., Summers M.M. & Eeckhaut I. 2016. Four new species of Mesomyzostoma (Myzostomida: Annelida). Journal of Natural History 50(1-2): 1-23. DOI:10.1080/00222933.2015.1056266
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IA (Annélides, Polychètes et Sipunculides) -
Summers M.M., Messing C.G. & Rouse G.W. 2014. Phylogeny of Comatulidae (Echinodermata: Crinoidea: Comatulida): A new classification and an assessment of morphological characters for crinoid taxonomy. Molecular Phylogenetics and Evolution 80: 319-339. DOI:10.1016/j.ympev.2014.06.030
Résumé [+] [-]Comatulidae Fleming, 1828 (previously, and incorrectly, Comasteridae A.H. Clark, 1908a), is a group of feather star crinoids currently divided into four accepted subfamilies, 21 genera and approximately 95 nominal species. Comatulidae is the most commonly-encountered and species-rich crinoid group on shallow tropical coral reefs, particularly in the Indo-western Pacific region (IWP). We conducted a molecular phylogenetic analysis of the group with concatenated data from up to seven genes for 43 nominal species spanning 17 genera and all subfamilies. Basal nodes returned low support, but maximum likelihood, maximum parsimony, and Bayesian analyses were largely congruent, permitting an evaluation of current taxonomy and analysis of morphological character transformations. Two of the four current subfamilies were paraphyletic, whereas 15 of the 17 included genera returned as monophyletic. We provide a new classification with two subfamilies, Comatulinae and Comatellinae n. subfamily Summers, Messing, & Rouse, the former containing five tribes. We revised membership of analyzed genera to make them all clades and erected Anneissia n. gen. Summers, Messing, & Rouse. Transformation analyses for morphological features generally used in feather star classification (e.g., ray branching patterns, articulations) and those specifically for Comatulidae (e.g., comb pinnule form, mouth placement) were labile with considerable homoplasy. These traditional characters, in combination, allow for generic diagnoses, but in most cases we did not recover apomorphies for subfamilies, tribes, and genera. New morphological characters that will be informative for crinoid taxonomy and identification are still needed. DNA sequence data currently provides the most reliable method of identification to the species-level for many taxa of Comatulidae.
Campagnes accessibles citées (2) [+] [-]
Codes des collections associés: IE (Échinodermes) -
Summers M.M., Al-hakim I.I. & Rouse G.W. 2014. Turbo-taxonomy: 21 new species of Myzostomida (Annelida). Zootaxa 3873(4): 301-344. DOI:10.11646/zootaxa.3873.4.1
Résumé [+] [-]An efficient protocol to identify and describe species of Myzostomida is outlined and demonstrated. This taxonomic approach relies on careful identification (facilitated by an included comprehensive table of available names with relevant geographical and host information) and concise descriptions combined with DNA sequencing, live photography, and accurate host identification. Twenty-one new species are described following these guidelines: Asteromyzostomum grygieri n. sp., Endomyzostoma scotia n. sp., Endomyzostoma neridae n. sp., Mesomyzostoma lanterbecqae n. sp., Hypomyzostoma jasoni n. sp., Hypomyzostoma jonathoni n. sp., Myzostoma debiae n. sp., Myzostoma eeckhauti n. sp., Myzostoma hollandi n. sp., Myzostoma indocuniculus n. sp., Myzostoma josefinae n. sp., Myzostoma kymae n. sp., Myzostoma laurenae n. sp., Myzostoma miki n. sp., Myzostoma pipkini n. sp., Myzostoma susanae n. sp., Myzostoma tertiusi n. sp., Protomyzostomum lingua n. sp., Protomyzostomum roseus n. sp., Pulvinomyzostomum inaki n. sp., and Pulvinomyzostomum messingi n. sp.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IA (Annélides, Polychètes et Sipunculides)