Fiche participant :
Nom : Fedosov
Prénom : Alexander
Liste des participations aux campagnes accessibles [+] [-]
- ATIMO VATAE
- Lavanono (Tue May 25 00:00:00 CEST 2010 - Sat Jun 12 00:00:00 CEST 2010)
- Collecte - Tri (Malacologie, Académie des sciences de Russie)
- KANACONO
- Leg 1 (Tue Aug 09 00:00:00 CEST 2016 - Sun Aug 21 00:00:00 CEST 2016)
- Collecte - Tri (Malacologie, Académie des sciences de Russie)
- Leg 2 (Mon Aug 22 00:00:00 CEST 2016 - Tue Aug 30 00:00:00 CEST 2016)
- Collecte - Tri (Malacologie, Académie des sciences de Russie)
- PAPUA NIUGINI
- Shore-based sampling (Mon Nov 05 00:00:00 CET 2012 - Fri Dec 14 00:00:00 CET 2012)
- ( Académie des sciences de Russie)
- Leg 4. Deep‐water dredging/trawling (Tue Dec 04 00:00:00 CET 2012 - Fri Dec 14 00:00:00 CET 2012)
- ( Académie des sciences de Russie)
- Tuhaa Pae 2013
- (Wed Mar 06 00:00:00 CET 2013 - Wed Apr 10 00:00:00 CEST 2013)
- Wed Mar 06 00:00:00 CET 2013 - Wed Apr 10 00:00:00 CEST 2013 Participant (Malacologie, Académie des sciences de Russie)
Bibliographie (37) [+] [-]
Exporter les bibliographies
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Abdelkrim J., Aznar-cormano L., Buge B., Fedosov A., Kantor Y., Zaharias P. & Puillandre N. 2018. Delimiting species of marine gastropods (Turridae, Conoidea) using RAD sequencing in an integrative taxonomy framework. Molecular Ecology 27(22): 4591-4611. DOI:10.1111/mec.14882
Résumé [+] [-]Species delimitation in poorly known and diverse taxa is usually performed based on monolocus, DNA-barcoding-like approaches, while multilocus data are often used to test alternative species hypotheses in well-studied groups. We combined both approaches to delimit species in the Xenuroturris/Iotyrris complex, a group of venomous marine gastropods from the Indo-P acific. First, COI sequences were analysed using three methods of species delimitation to propose primary species hypotheses. Second, RAD sequencing data were also obtained and a maximum-likelihood phylogenetic tree produced. We tested the impact of the level of missing data on the robustness of the phylogenetic tree obtained with the RAD-seq data. Alternative species partitions revealed with the COI data set were also tested using the RAD-seq data and the Bayes factor species delimitation method. The congruence between the species hypotheses proposed with the mitochondrial nuclear data sets, together with the morphological variability of the shell and the radula and the distribution pattern, was used to turn the primary species hypotheses into secondary species hypotheses. Allopatric primary species hypotheses defined with the COI gene were interpreted to correspond to intraspecific structure. Most of the species are found sympatrically in the Philippines, and only one is confidently identified as a new species and described as Iotyrris conotaxis n. sp. The results obtained demonstrate the efficiency of the combined monolocus/multilocus approach to delimit species.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Abdelkrim J., Aznar-cormano L., Fedosov A.E., Kantor Y.I., Lozouet P., Phuong M.A., Zaharias P. & Puillandre N. 2018. Exon-Capture-Based Phylogeny and Diversification of the Venomous Gastropods (Neogastropoda, Conoidea), in Vidal N.(Ed.), Molecular Biology and Evolution 35(10): 2355-2374. DOI:10.1093/molbev/msy144
Résumé [+] [-]Transcriptome-based exon capture methods provide an approach to recover several hundred markers from genomic DNA, allowing for robust phylogenetic estimation at deep timescales. We applied this method to a highly diverse group of venomous marine snails, Conoidea, for which published phylogenetic trees remain mostly unresolved for the deeper nodes. We targeted 850 protein coding genes (678,322 bp) in ca. 120 samples, spanning all (except one) known families of Conoidea and a broad selection of non-Conoidea neogastropods. The capture was successful for most samples, although capture efficiency decreased when DNA libraries were of insufficient quality and/or quantity (dried samples or low starting DNA concentration) and when targeting the most divergent lineages. An average of 75.4% of proteins was recovered, and the resulting tree, reconstructed using both supermatrix (IQ-tree) and supertree (Astral-II, combined with the Weighted Statistical Binning method) approaches, are almost fully supported. A reconstructed fossil-calibrated tree dates the origin of Conoidea to the Lower Cretaceous. We provide descriptions for two new families. The phylogeny revealed in this study provides a robust framework to reinterpret changes in Conoidea anatomy through time. Finally, we used the phylogeny to test the impact of the venom gland and radular type on diversification rates. Our analyses revealed that repeated losses of the venom gland had no effect on diversification rates, while families with a breadth of radula types showed increases in diversification rates, thus suggesting that trophic ecology may have an impact on the evolution of Conoidea.
Campagnes accessibles citées (23) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CEAMARC-AA, CONCALIS, Restreint, DongSha 2014, EXBODI, GUYANE 2014, ILES DU SALUT, INHACA 2011, KARUBENTHOS 2012, KAVIENG 2014, MAINBAZA, NORFOLK 2, NanHai 2014, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMONBOA 3, TAIWAN 2013, TERRASSES, Restreint
Codes des collections associés: IM (Mollusques) -
Barkalova V.O., Fedosov A.E. & Kantor Y.I. 2016. Morphology of the anterior digestive system of tonnoideans (Gastropoda: Caenogastropoda) with an emphasis on the foregut glands. Molluscan Research 36(1): 54-73. DOI:10.1080/13235818.2015.1082954
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Fedosov A. & Puillandre N. 2021. Deep Downunder: Integrative taxonomy of Austrobela , Spergo , Theta and Austrotheta (Gastropoda: Conoidea: Raphitomidae) from the deep sea of Australia. Journal of Zoological Systematics and Evolutionary Research 59(8): 1718-1753. DOI:10.1111/jzs.12512
Résumé [+] [-]Recent sampling efforts in the deep seas of southern and eastern Australia have generated a wealth of DNA-suitable material of neogastropods of the family Raphitomidae. Based on this material, a molecular phylogeny of the family has revealed a considerable amount of genus and species level lineages previously unknown to science. These taxa are now the focus of current integrative taxonomic research. As part of this ongoing investigation, this study focuses on the genera Austrobela, Austrotheta (both Criscione, Hallan, Puillandre & Fedosov, 2020), Spergo Dall, 1895 and Theta Clarke, 1959. We subjected a comprehensive mitochondrial DNA dataset of representative deep-sea raphitomids to Automatic Barcode Gap Discovery, which recognized 24 primary species hypotheses (PSHs). Following additional evaluation of shell and radular features, as well as examination of geographic and bathymetric ranges, 18 of these PSHs were converted to secondary species hypotheses (SSHs). Based on the evidence available, the most likely speciation mechanisms involved were evaluated for each pair of sister SSHs, including niche partitioning. Eleven SSHs were recognized as new and their systematic descriptions are provided herein. Of these, four were attributed to Austrobela, one to Austrotheta, four to Spergo and two to Theta. While all new species are endemic to Australian waters, other species studied herein exhibit wide Indo-Pacific distributions, adding to the growing body of evidence suggesting that wide geographic ranges in deep-sea Raphitomidae are more common than previously assumed.
Campagnes accessibles citées (19) [+] [-]AURORA 2007, BATHUS 3, BIOMAGLO, BIOPAPUA, CHALCAL 2, CONCALIS, EBISCO, KANADEEP, KARUBAR, KARUBENTHOS 2, NORFOLK 2, NanHai 2014, PAPUA NIUGINI, SALOMON 2, TAIWAN 2013, Restreint, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Puillandre N. & Fedosov A. 2021. Snails in depth: integrative taxonomy of Famelica, Glaciotomella and Rimosodaphnella (Conoidea: Raphitomidae) from the deep sea of temperate Australia. Invertebrate Systematics 35(8): 940-962. DOI:10.1071/IS21008
Résumé [+] [-]The deep sea of temperate south-eastern Australia appears to be a ‘hotspot’ for diversity and endemism of conoidean neogastropods of the family Raphitomidae. Following a series of expeditions in the region, a considerable amount of relevant DNA-suitable material has become available. A molecular phylogeny based on this material has facilitated the identification of diagnostic morphological characters, allowing the circumscription of monophyletic genera and the introduction of several new genus-level taxa. Both named and new genera are presently being investigated through integrative taxonomy, with the discovery of a significant number of undescribed species. As part of this ongoing investigation, our study focuses on the genera Famelica Bouchet & Warén, 1980, Glaciotomella Criscione, Hallan, Fedosov & Puillandre, 2020 and Rimosodaphnella Cossmann, 1914. We subjected a comprehensive mitochondrial DNA dataset of representative deep-sea raphitomids to the species delimitation methods ABGD and ASAP that recognised 18 and 15 primary species hypotheses (PSHs) respectively. Following additional evaluation of shell and radular features, and examination of geographic and bathymetric ranges, nine of these PSHs were converted to secondary species hypotheses (SSHs). Four SSHs (two in Famelica and two in Rimosodaphnella) were recognised as new, and formal descriptions are provided herein.
Campagnes accessibles citées (14) [+] [-]AURORA 2007, BIOPAPUA, BOA1, EXBODI, KANACONO, KAVIENG 2014, MAINBAZA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TARASOC, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Criscione F., Hallan A., Puillandre N. & Fedosov A. 2021. Where the snails have no name: a molecular phylogeny of Raphitomidae (Neogastropoda: Conoidea) uncovers vast unexplored diversity in the deep seas of temperate southern and eastern Australia. Zoological Journal of the Linnean Society 191(4): 961-1000. DOI:10.1093/zoolinnean/zlaa088
Résumé [+] [-]Abstract Although raphitomid snails are a dominant component of gastropod communities in deep seas worldwide, their systematics is still largely tentative. We assembled the most complete sampling of Raphitomidae from south-eastern Australia to date. Based on morphological and molecular data from this material, we produced a robust phylogenetic framework and used it to delimit genera. For the focus area, our results show a large proportion of undescribed species- and genus-level taxa, 11 of which are formally described herein. We demonstrate that the examination of purely morphological characters rarely suffices for the purpose of accurate genus delimitation. As a result, some traditionally highly diverse raphitomid genera (such as Gymnobela) turn out to be artificial assemblages of several unrelated, mostly undescribed, genus-level lineages. Our data suggest that comparable configurations of shell and radular features, observed at the genus level, commonly do not reflect true phylogenetic relationships. However, our results are inconclusive as to whether homoplasy or conservatism are the drivers of this phenomenon. Accommodating for the inevitable sampling biases, south-eastern Australia appears as a possible hotspot for both raphitomid diversity and endemism, when compared with adjacent areas.
Campagnes accessibles citées (7) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fassio G., Modica M.V., Mary L., Zaharias P., Fedosov A.E., Gorson J., Kantor Y.I., Holford M. & Puillandre N. 2019. Venom Diversity and Evolution in the Most Divergent Cone Snail Genus Profundiconus. Toxins 11(11): 623. DOI:10.3390/toxins11110623
Résumé [+] [-]Profundiconus is the most divergent cone snail genus and its unique phylogenetic position, sister to the rest of the family Conidae, makes it a key taxon for examining venom evolution and diversity. Venom gland and foot transcriptomes of Profundiconus cf. vaubani and Profundiconus neocaledonicus were de novo assembled, annotated, and analyzed for differential expression. One hundred and thirty-seven venom components were identified from P. cf. vaubani and 82 from P. neocaledonicus, with only four shared by both species. The majority of the transcript diversity was composed of putative peptides, including conotoxins, profunditoxins, turripeptides, insulin, and prohormone-4. However, there were also a significant percentage of other putative venom components such as chymotrypsin and L-rhamnose-binding lectin. The large majority of conotoxins appeared to be from new gene superfamilies, three of which are highly different from previously reported venom peptide toxins. Their low conotoxin diversity and the type of insulin found suggested that these species, for which no ecological information are available, have a worm or molluscan diet associated with a narrow dietary breadth. Our results indicate that Profundiconus venom is highly distinct from that of other cone snails, and therefore important for examining venom evolution in the Conidae family.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fassio G., Russo P., Bonomolo G., Fedosov A.E., Modica M., Nocella E. & Oliverio M. 2022. A molecular framework for the systematics of the Mediterranean spindle-shells (Gastropoda, Neogastropoda, Fasciolariidae, Fusininae). Mediterranean Marine Science 23(3): 623-636. DOI:10.12681/mms.29935
Résumé [+] [-]A remarkably high diversity of native small spindle-shells (Gastropoda, Fasciolariidae, Fusininae) has been recently inventoried in the Mediterranean Sea, with 23 species identified based on shell morphology. They have almost invariably been classified in the genus Fusinus, and a few of them recently moved to other genera (Aptyxis Troschel 1868, Aegeofusinus Russo, 2017 and Gracilipurpura Jousseaume, 1880), mostly based on the sole shell features. We have reconstructed a molecular phylogenetic framework for the Mediterranean Fusininae, focusing on native species representative of the genus-level taxa. Our results confirmed that Fusinus s.s. (type species Murex colus Linnaeus, 1758) should be restricted to a group of large-shelled species from the Indo-West Pacific and does not fit any of the small-shelled Mediterranean fusinines. We confirm that Murex syracusanus Linnaeus, 1758 represents a distinct lineage, and show that for all the remaining species the pattern is suggestive of a single monophyletic radiation of small Mediterranean fusinines, for which the name Pseudofusus Monterosato, 1884 must be used
Campagnes accessibles citées (23) [+] [-]ATIMO VATAE, AURORA 2007, CONCALIS, Restreint, EBISCO, EXBODI, GUYANE 2014, KANACONO, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MIRIKY, NanHai 2014, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, SANTO 2006, TARASOC, TERRASSES, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A.E. & Puillandre N. 2020. Integrative taxonomy of the Clavus canalicularis species complex (Drilliidae, Conoidea, Gastropoda) with description of four new species. Molluscan Research 40(3): 251-266. DOI:10.1080/13235818.2020.1788695
Résumé [+] [-]The conoidean family Drilliidae Olsson, 1964 is a species-rich lineage of marine gastropods, showing a high degree of diversification in comparison to other families of Conoidea. Despite intensive molecular phylogenetic studies during the last decade that have led to notable rearrangements of conoidean systematics, the genus- and species-level taxonomy of Drilliidae has not thus far been affected and remains entirely based on shell features. In the current study we revisit species delimitation in a morphological cluster of species from the Indo-Pacific referred to as the Clavus canalicularis complex, using an integrative taxonomy approach. The species in the complex possess robust thick-walled shells typically over 15 mm in height with sculpture of prominent rounded nodules located at the whorl’s shoulder, sometimes sharp and squamiform, or producing long spines. We find that in addition to five known species, the complex comprises four new species. These are described as Clavus brianmayi n. sp. (New Caledonia), Clavus davidgilmouri n. sp. (the Philippines), Clavus andreolbrichi n. sp. (Vanuatu and New Ireland) and Clavus kirkhammetti n. sp. (Madagascar). Clavus exasperatus (Reeve, 1843), which was previously considered widely distributed in IndoPacific, is shown to be confined to the western Indian Ocean.
Campagnes accessibles citées (5) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A., Puillandre N., Kantor Y. & Bouchet P. 2015. Phylogeny and systematics of mitriform gastropods (Mollusca: Gastropoda: Neogastropoda): Phylogeny of Mitriform Gastropods. Zoological Journal of the Linnean Society 175(2): 336-359. DOI:10.1111/zoj.12278
Résumé [+] [-]With about 800 Recent species, ‘miters’ are a widely distributed group of tropical and subtropical gastropods that are most diverse in the Indo-West Pacific. They include the two families Mitridae and Costellariidae, similar in shell morphology and traditionally treated as close relatives. Some genera of deep-water Ptychatractidae and Volutomitridae are close to miters in shell morphology, and the term ‘mitriform gastropods’ has been introduced to refer to Mitridae, Costellariidae, and this assortment of convergent forms. The present study aimed at the reconstruction of phylogenetic relationships of mitriform gastropods based on representative taxon sampling. Four genetic markers [cytochrome c oxidase subunit I (COI), 16S and 12S rRNA mitochondrial genes, and H3 (Histone 3) nuclear gene] were sequenced for over 90 species in 20 genera, and the molecular data set was supplemented by studies of radula morphology. Our analysis recovered Mitridae as a monophyletic group, whereas the genus Mitra was found to be polyphyletic. Of 42 mitrid species included in the analysis, 37 formed a well-supported ‘core Mitridae’ consisting of four major clades, three of them consistent with the subfamilies Cylindromitrinae, Imbricariinae, and Mitrinae, and Strigatella paupercula standing out by itself. Basal to the ‘core Mitridae’ are four minor lineages, with the genus Charitodoron recognized as sister group to all other Mitridae. The deepwater family Pyramimitridae shows a sister relationship to the Mitridae, with high support for a Pyramimitridae + Mitridae clade. Our results recover the monophyly of the Costellariidae, which form a wellsupported clade that also includes Ptychatractidae, Columbariinae, and Volutomitridae, but not Mitridae. Most derived and diverse amongst Costellariidae are species of Vexillum, characterized by a bow-shaped, multicuspidate rachidian tooth. Several previously unrecognized deep-water costellariid lineages are revealed. Their members retain some plesiomorphies – in particular a tricuspidate rachidian tooth – that makes them morphologically intermediate between ptychatractids and Vexillum. The taxa of Ptychatractidae included in the analysis are not monophyletic, but form three well-supported, unrelated groupings, corresponding respectively to Ceratoxancus + Latiromitra, Exilia, and Exiliodea. None of them shows an affinity to Pseudolividae.
Campagnes accessibles citées (21) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CONCALIS, EBISCO, EXBODI, INHACA 2011, MAINBAZA, MIRIKY, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, TARASOC, TERRASSES, Tuhaa Pae 2013, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A., Puillandre N., Herrmann M., Kantor Y., Oliverio M., Dgebuadze P., Modica M.V. & Bouchet P. 2018. The collapse of Mitra: molecular systematics and morphology of the Mitridae (Gastropoda: Neogastropoda). Zoological Journal of the Linnean Society 20: 1-85. DOI:10.1093/zoolinnean/zlx073/4855867
Résumé [+] [-]Alongside confirmation of the monophyly of the gastropod family Mitridae, a recent molecular phylogenetic analysis disclosed multiple inconsistencies with the existing taxonomic framework. In the present study, we expanded the molecular sampling to 103 species, representing 26% of the 402 extant species currently accepted in the family and 16 of the 19 currently accepted extant genera; 83 species were sequenced for four molecular markers [cytochrome c oxidase subunit I (COI), 16S and 12S rRNA, and H3 (Histone 3)]. Molecular analyses were supplemented by morphological studies, focused on characters of the radula and, in a more restricted data set, proboscis anatomy. These data form the basis for a revised classification of the Mitridae. A first dichotomy divides mitrids into two unequal clades, Charitodoron and the Mitridae s.s. Species of Charitodoron show profound differences to all other Mitridae in foregut anatomy (lacking an epiproboscis) and shell morphology (smooth columella, bulbous protoconch of non-planktotrophic type), which leads to the erection of the separate family Charitodoronidae fam. nov. Three traditional subfamilies (Mitrinae, Cylindromitrinae and Imbricariinae) correspond to three of the inferred phylogenetic lineages of Mitridae s.s.; we redefine their contents, reinstate Strigatellinae Troschel, 1869 as valid and establish the new subfamily Isarinae. In the absence of molecular material, a sixth subfamily, Pleioptygmatinae, is included in Mitridae based on morphological considerations only. To resolve the polyphyly of Mitra and Cancilla in their current taxonomic extension, we reinstate the genera Episcomitra Monterosato, 1917, Isara H. & A. Adams, 1853 and Probata Sarasúa, 1989 and establish 11 new genera: Quasimitra, Roseomitra, Fusidomiporta, Profundimitra, Cancillopsis, Pseudonebularia, Gemmulimitra and Neotiara in Mitrinae; Imbricariopsis in Imbricariinae; Carinomitra and Condylomitra are left unassigned to a subfamily. Altogether 32 genera are recognized within the family. Their diversity and distribution are discussed, along with general trends in morphological evolution of the family.
Campagnes accessibles citées (26) [+] [-]ATIMO VATAE, AURORA 2007, BIOCAL, BIOPAPUA, BOA1, CONCALIS, CORAIL 2, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMONBOA 3, SANTO 2006, SMIB 4, TARASOC, Tuhaa Pae 2013, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A., Zaharias P. & Puillandre N. 2021. A phylogeny-aware approach reveals unexpected venom components in divergent lineages of cone snails. Proceedings of the Royal Society B: Biological Sciences 288(1954): 20211017. DOI:10.1098/rspb.2021.1017
Résumé [+] [-]Marine gastropods of the genus Conus are renowned for their remarkable diversity and deadly venoms. While Conus venoms are increasingly well studied for their biomedical applications, we know surprisingly little about venom composition in other lineages of Conidae. We performed comprehensive venom transcriptomic profiling for Conasprella coriolisi and Pygmaeconus traillii, first time for both respective genera. We complemented referencebased transcriptome annotation by a de novo toxin prediction guided by phylogeny, which involved transcriptomic data on two additional ‘divergent’ cone snail lineages, Profundiconus, and Californiconus. We identified toxin clusters (SSCs) shared among all or some of the four analysed genera based on the identity of the signal region—a molecular tag present in toxins. In total, 116 and 98 putative toxins represent 29 and 28 toxin gene superfamilies in Conasprella and Pygmaeconus, respectively; about quarter of these only found by semi-manual annotation of the SSCs. Two rare gene superfamilies, originally identified from fish-hunting cone snails, were detected outside Conus rather unexpectedly, so we further investigated their distribution across Conidae radiation. We demonstrate that both these, in fact, are ubiquitous in Conidae, sometimes with extremely high expression. Our findings demonstrate how a phylogeny-aware approach circumvents methodological caveats of similarity-based transcriptome annotation
Campagnes accessibles citées (2) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Caballer gutierrez M., Buge B., Sorokin P.V., Puillandre N. & Bouchet P. 2019. Mapping the missing branch on the neogastropod tree of life: molecular phylogeny of marginelliform gastropods. Journal of Molluscan Studies 85(4): 439-451. DOI:10.1093/mollus/eyz028
Résumé [+] [-]Marginelliform gastropods are a heterogeneous and diverse group of molluscs encompassing over 1,600 living species, among which are the smallest known neogastropods. The relationships of marginelliform gastropods within the order Neogastropoda are controversial, and the monophyly of the two marginelliform families the Marginellidae J. Fleming, 1828 and the Cystiscidae Stimpson, 1865, remains unconfirmed. DNA sequence data have never been used to assess the relationships of the marginelliform gastropods, making this group the only major branch missing in our current understanding of the neogastropod tree of life. Here we report results of the first multilocus phylogenetic analysis of marginelliform gastropods, which is based on a dataset comprising 63 species (20 genera) of Marginellidae and Cystiscidae, and a wide range of neogastropod lineages. The Marginellidae and Cystiscidae form a moderately supported clade that is sister to the family Volutidae. Marginellona gigas appears to be sister to all other marginelliforms. The subfamily Marginellinae was recovered as a well-supported clade, and good resolution of this part of the tree makes it possible to propose amendments to the family-level classification of the group. The relationship between Granulina and other marginelliforms could not be resolved and requires further study. Due to poor resolution of basal relationships within the Marginellidae–Cystiscidae clade, the monophyly of the Cystiscidae was neither confirmed nor convincingly rejected. The shell morphology of most marginellid and cystiscid genera is taxonomically not very informative but, nevertheless, of the traditionally recognized genera only Gibberula and Dentimargo were shown to be polyphyletic. Although a comprehensive systematic revision of the group requires more extensive taxonomic sampling (e.g. with better representation of the type species of nominal genus-group names), our results support the superfamily Volutoidea, comprising four families (Volutidae, Cystiscidae, Marginellidae and Marginellonidae), with the placement of the Granulinidae uncertain for the time being.
Campagnes accessibles citées (15) [+] [-]ATIMO VATAE, Restreint, DongSha 2014, EXBODI, GUYANE 2014, ILES DU SALUT, INHACA 2011, KANACONO, KARUBENTHOS 2, KAVIENG 2014, MADEEP, MADIBENTHOS, MAINBAZA, PAPUA NIUGINI, Restreint
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Malcolm G., Terryn Y., Gorson J., Modica M.V., Holford M. & Puillandre N. 2019. Phylogenetic classification of the family Terebridae (Neogastropoda: Conoidea). Journal of Molluscan Studies 85(4): 359-388. DOI:10.1093/mollus/eyz004
Résumé [+] [-]The conoidean family Terebridae is an intriguing lineage of marine gastropods, which are of considerable interest due to their varied anatomy and complex venoms. Terebrids are abundant, easily recognizable and widely distributed in tropical and subtropical waters, but our findings have demonstrated that their systematics requires revision. Here we elaborate the classification of Terebridae based on a recently published molecular phylogeny of 154 species, plus characters of the shell and anterior alimentary system. The 407 living species of the family, including seven species described herein, are assigned to three subfamilies: Pellifroniinae new subfamily, Pervicaciinae and Terebrinae. The Pellifroniinae comprises five deep-water species in two genera, Pellifronia and Bathyterebra n. gen. Pellifroniinae possess a radula of duplex marginal teeth, well-developed proboscis and venom gland, and a very small rhynchodeal introvert. The Pervicaciinae includes c. 50 species in the predominantly Indo-Pacific genera Duplicaria and Partecosta. Pervicaciinae possess salivary glands, a radula of solid recurved marginal teeth and a weakly developed rhynchodeal introvert, but lack proboscis and venom gland. The remaining Terebridae species are classified into 15 genera in the subfamily Terebrinae (including four genera described herein); nine genera are defined on the basis of phylogenetic data and six solely on shell morphology. The Indo-Pacific genera Profunditerebra n. gen., Maculauger n. gen. and Myurellopsis n. gen. each include about a dozen species. The first is restricted to the deep waters of the Indo-West Pacific, while the latter two range widely in both geographic and bathymetric distribution. Neoterebra n. gen. encompasses about 65 species from a range of localities in the eastern Pacific, Caribbean, and Atlantic, and from varying depths. To characterize the highly diversified genera Terebra, Punctoterebra, Myurella and Duplicaria, each of which comprise several morphological clusters, we propose the use of DNA-based diagnoses. These diagnoses are combined with more informative descriptions to define most of the supraspecific taxa of Terebridae, to provide a comprehensive revision of the group.
Campagnes accessibles citées (20) [+] [-]ATIMO VATAE, CONCALIS, EXBODI, INHACA 2011, KARUBENTHOS 2, KARUBENTHOS 2012, KAVIENG 2014, MADEEP, Restreint, MIRIKY, MUSORSTOM 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SANTO 2006, TERRASSES, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Fedosov A.E. 2011. Five new species of the genus Lienardia (Conidae: Gastropoda) from the shallow waters of central Philippines. Ruthenica 21(2): 123-135
Campagnes accessibles citées (2) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E. & Kantor Y.I. 2012. A new species and genus of enigmatic turriform Fasciolariidae from the Central Indo-Pacific. Archiv für Molluskenkunde 141(2): 137-144
Résumé [+] [-]A new genus and species of Fasciolariidae, Angulofusus nedae n. gen. n. sp. conchologically superficially resembling some Conoidea is described. Radula, anatomy and coloration of the body of the new species suggest that it belongs to subfamily Fusininae, being very similar in anatomy to species of the genus Amiantofusus. The species is broadly distributed in the Indo-Pacific, from the Philippines, through Vanuatu and New Caledonia to Wallis and Futuna in 40 to 105 m.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E. & Puillandre N. 2012. Phylogeny and taxonomy of the Kermia–Pseudodaphnella (Mollusca: Gastropoda: Raphitomidae) genus complex: a remarkable radiation via diversification of larval development. Systematics and Biodiversity 10(4): 447-477. DOI:10.1080/14772000.2012.753137
Résumé [+] [-]Conoidean gastropods of the genera Kermia, Oliver, and Pseudodaphnella Boettger, (Raphitomidae) are common in shallow-water habitats of the tropical Indo-Pacific. They form a distinct morphologically homogeneous complex, easily recognizable by sculpture and colour pattern, encompassing around 80 described species. Examination of a vast material accumulated during recent expeditions in various regions of the Indo-Pacific revealed a number of undescribed species of this complex. Our material included 32 morphospecies available for molecular phylogenetic study; phylogenetic reconstruction based on the COI gene confirmed the species hypotheses based on morphological characters. A total of 18 terminal taxa were attributed to known species and 14 were identified as new species. Of these, 12 species, for which sufficient material was available, are described. Phylogenetic analysis indicated close relationships of the genera Kermia and Pseudodaphnella with members of some other conoidean genera (specifically Exomilus Hedley, , Paramontana Laseron, and Thetidos Hedley, ) and taxonomic implications of the data obtained are discussed. To test the taxonomic value of protoconch and review its wide use in classification of Conoidea, the evolution of the protoconch morphology was reconstructed using a phylogenetic tree. It has revealed that protoconchs of different types may appear in closely related species, sometimes hardly distinguishable by teleoconch morphology. A switch from planctotrophic to non-planctotrophic mode of development occurred at least four times in the evolutionary history of the Kermia Pseudodaphnella complex, indicating high developmental plasticity of the group. Its role in radiation of the Kermia Pseudodaphnella complex and applications for use of protoconch morphology in the classification of Conoidea are discussed.
Campagnes accessibles citées (8) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Olivera B.M., Watkins M. & Barkalova V. 2014. A new species of Casmaria H. Adams & A. Adams, 1853 (Gastropoda, Cassidae) from the Philippines identified by molecular data. European Journal of Taxonomy 78: 1-13. DOI:10.5852/ejt.2014.78
Résumé [+] [-]The genus Casmaria H. Adams & A. Adams, 1853 (family Cassidae) is widespread in the tropical Indo-Pacific and has been documented from some Atlantic localities as well. Two Casmaria species, C. erinaceus (Linnaeus, 1758) and C. ponderosa (Gmelin, 1791), are common in Indo-Pacific shallow-water sandy bottom communities and are characterized by high morphological variability; both species encompass multiple, often sympatric forms of uncertain status. In the present study we carry out a phylogenetic analysis of some Philippine Casmaria morphs and demonstrate that one of the distinctive morphs earlier assigned to Casmaria ponderosa is in fact a different species, which we describe as Casmaria boblehmani sp. nov. The smooth form of Casmaria ponderosa, C. ponderosa ponderosa, and the solid nodulose form, widely called “form nodulosa” despite being strikingly different in shell morphology, are shown to be conspecific. Studied specimens of these two morphs even from different localities share the same haplotype of the CO1 gene. In light of these new data on the morphological variability of Casmaria species, we discuss criteria of species delimitation in the genus Casmaria and possible affinities of Casmaria boblehmani sp. nov. within the genus.
Campagnes accessibles citées (2) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E. & Stahlschmidt P. 2014. Revision of the genus Thetidos Hedley, 1899 (Gastropoda: Conoidea: Raphitomidae) in the Indo-Pacific with descriptions of three new species. Molluscan Research 34(4): 258-273. DOI:10.1080/13235818.2014.909557
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Fedosov A.E., Stahlschmidt P., Puillandre N., Aznar-cormano L. & Bouchet P. 2017. Not all spotted cats are leopards: evidence for a Hemilienardia ocellata species complex (Gastropoda: Conoidea: Raphitomidae). European Journal of Taxonomy 268: 1-20. DOI:10.5852/ejt.2017.268
Résumé [+] [-]The small conoidean Hemilienardia ocellata is one of the easily recognizable Indo-Pacific “turrids”, primarily because of its remarkable eyespot colour pattern. Morphological and molecular phylogenetic analyses revealed four species that share this “characteristic” colour pattern but demonstrate consistent differences in size and shell proportions. Three new species – Hemilienardia acinonyx sp. nov. from the Philippines, H. lynx sp. nov. from Papua New Guinea and H. pardus sp. nov. from the Society and Loyalty Islands – are described based on the results of phylogenetic analyses. Although the H. ocellata species complex clade falls in a monophyletic Hemilienardia, H. ocellata and H. acinonyx sp. nov. possess a radula with semi-enrolled or notably flattened triangular marginal teeth, a condition that diverges substantially from the standard radular morphology of Hemilienardia and other raphitomids.
Campagnes accessibles citées (8) [+] [-]
Codes des collections associés: IM (Mollusques) -
Hallan A., Criscione F., Fedosov A. & Puillandre N. 2021. Few and far apart: integrative taxonomy of Australian species of Gladiobela and Pagodibela (Conoidea : Raphitomidae) reveals patterns of wide distributions and low abundance. Invertebrate Systematics. DOI:10.1071/IS20017
Résumé [+] [-]The deep-sea malacofauna of temperate Australia remains comparatively poorly known. However, a recent influx of DNA-suitable material obtained from a series of deep-sea cruises has facilitated integrative taxonomic study on the Conoidea (Caenogastropoda : Neogastropoda). Building on a recent molecular phylogeny of the conoidean family Raphitomidae, this study focussed on the genera Gladiobela and Pagodibela (both Criscione, Hallan, Puillandre & Fedosov, 2020). We subjected a representative mtDNA cox1 dataset of deep-sea raphitomids to ABGD, which recognised 14 primary species hypotheses (PSHs), 9 of which were converted to secondary species hypotheses (SSHs). Following the additional examination of the shell and hypodermic radula features, as well as consideration of bathymetric and geographic data, seven of these SSHs were recognised as new to science and given full species rank. Subsequently, systematic descriptions are provided herein. Of these, five are attributed to Gladiobela (three of which are endemic to Australia and two more widely distributed) and two are placed in Pagodibela (one endemic to southern Australia and one widespread in the Pacific). The rarity of many ‘turrids’ reported in previous studies is confirmed herein, as particularly indicated by highly disjunct geographic records for two taxa. Additionally, several of the studied taxa exhibit wide Indo-Pacific distributions, suggesting that wide geographic ranges in deep-sea ‘turrids’ may be more common than previously assumed. Finally, impediments to deep-sea ‘turrid’ taxonomy in light of such comparative rarity and unexpectedly wide distributions are discussed.
Campagnes accessibles citées (13) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, BOA1, EBISCO, EXBODI, KANACONO, KARUBAR, PAPUA NIUGINI, SALOMON 2, TARASOC, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Harasewych M.G., Uribe J.E. & Fedosov A.E. 2020. Costapex baldwinae, a new species of bathyal costellariid (Mollusca: Gastropoda: Neogastropoda: Costellariidae) from the Caribbean Sea. PROCEEDINGS OF THE BIOLOGICAL SOCIETY OF WASHINGTON 133(1): 134-141
Résumé [+] [-]Costapex baldwinae, new species, is described from deep reef habitats of the southern and eastern Caribbean Sea, including Curac¸ao, Dominica and Guadeloupe, where it occurs at bathyal depths on sunken wood. It is assigned to the genus Costapex based on phylogenetic analyses using partial sequences of COI, 12S and 16S mitochondrial genes that reveal it to be the sister species of two Indo-Pacific members of this genus. This new species most closely resembles Costapex martinorum (Cernohorsky, 1986) from the Philippines, but differs in being smaller, and in having a slightly lower spire and more prominently beaded spiral sculpture. Of the Caribbean species of costellariids, it is somewhat similar to Nodicostellaria laterculata (Sowerby II, 1874), which occurs in shallower water and has a white or tan rather than dark brown shell, and also a taller spire, more prominent axial sculpture, and a more rounded aperture. It differs from Vexillum styria (Dall, 1889), with which it co-occurs, in having a broader shell with a lower spire, prosocline rather than opisthocline axial ribs, and more prominent, strongly beaded spiral cords. Costapex baldwinae differs from both these taxa in having rachidian teeth with three cusps rather than five cusps (N. laterculata) or seven cusps (V. styria). The genus Costapex was previously known only from IndoPacific species. The discovery of this new species represents a significant expansion of the range of this genus into the Caribbean Sea.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Harasewych M.G., Uribe J.E. & Fedosov A.E. 2020. Costapex baldwinae, a new species of bathyal costellariid (Mollusca: Gastropoda: Neogastropoda: Costellariidae) from the Caribbean Sea. Proceedings of the Biological Society of Washington 133(1). DOI:10.2988/20-00010
Résumé [+] [-]Costapex baldwinae, new species, is described from deep reef habitats of the southern and eastern Caribbean Sea, including Curac¸ao, Dominica and Guadeloupe, where it occurs at bathyal depths on sunken wood. It is assigned to the genus Costapex based on phylogenetic analyses using partial sequences of COI, 12S and 16S mitochondrial genes that reveal it to be the sister species of two Indo-Pacific members of this genus. This new species most closely resembles Costapex martinorum (Cernohorsky, 1986) from the Philippines, but differs in being smaller, and in having a slightly lower spire and more prominently beaded spiral sculpture. Of the Caribbean species of costellariids, it is somewhat similar to Nodicostellaria laterculata (Sowerby II, 1874), which occurs in shallower water and has a white or tan rather than dark brown shell, and also a taller spire, more prominent axial sculpture, and a more rounded aperture. It differs from Vexillum styria (Dall, 1889), with which it co-occurs, in having a broader shell with a lower spire, prosocline rather than opisthocline axial ribs, and more prominent, strongly beaded spiral cords. Costapex baldwinae differs from both these taxa in having rachidian teeth with three cusps rather than five cusps (N. laterculata) or seven cusps (V. styria). The genus Costapex was previously known only from IndoPacific species. The discovery of this new species represents a significant expansion of the range of this genus into the Caribbean Sea.
Campagnes accessibles citées (1) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y., Fedosov A.E., Puillandre N., Bonillo C. & Bouchet P. 2017. Returning to the roots: morphology, molecular phylogeny and classification of the Olivoidea (Gastropoda: Neogastropoda). Zoological Journal of the Linnean Society 180: 493-541. DOI:10.1093/zoolinnean/zlw003
Résumé [+] [-]The superfamily Olivoidea is broadly distributed in the world’s oceans mostly in coastal waters at tropical and subtropical latitudes. It encompasses around 30 Recent genera and 460 species. Two families – Olividae and Olivellidae – are classically recognized within the superfamily. Their shell is very characteristic due to the presence of a modified callused anterior end and a fasciole. Prior to the present work, neither the monophyly of the superfamily nor the relationships among its genera had been tested with molecular phylogenetics. Four genetic markers [cytochrome c oxidase subunit I (COI), 16S and 12S rRNA mitochondrial genes, and Histone 3 (H3) nuclear gene] were sequenced for 42 species in 14 genera. Additionally, 18 species were sequenced for COI only. The molecular dataset was supplemented by anatomical and radula data. Our analysis recovered, albeit with weak support, a monophyletic Olivoidea, which in turn includes with 100% support, in addition to traditional olivoideans, representatives of a paraphyletic Pseudolividae. The relationships between the former families and subfamilies are drastically revised and a new classification of the superfamily is here proposed, now including five families: Bellolividae fam. nov., Benthobiidae fam. nov., Olividae, Pseudolividae and Ancillariidae. Within Olividae four subfamilies are recognized, reflecting the high morphological disparity within the family: Olivinae, Olivellinae, Agaroniinae and Calyptolivinae subfam. nov. All the recent genera are discussed and reclassified based on molecular phylogeny and/or morphology and anatomy. The homology of different features of the shells is established for the first time throughout the superfamily, and a refined terminology is proposed. Based on a correlation between anatomical characteristics and shell features and observations of live animals, we make hypotheses on which part of the mantle is responsible for depositing which callused feature of the shell. Our results demonstrate that morphological data alone should be used with caution for phylogenetic reconstructions. For instance, the radula – that is otherwise considered to be of fundamental importance in the taxonomy of Neogastropoda – is extremely variable within the single family Olividae, with a range of variation larger than within the rest of the entire superfamily. In the refined classification, Pseudolividae are nested within Olivoidea, which is partially returning to ‘the roots’, that is to the classification of Thiele (1929).
Campagnes accessibles citées (21) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, CONCALIS, Restreint, EBISCO, INHACA 2011, KARUBENTHOS 2012, KAVIENG 2014, MAINBAZA, MIRIKY, NORFOLK 2, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, TARASOC, TERRASSES
Codes des collections associés: IM (Mollusques) -
Kantor Y., Fedosov A. & Puillandre N. 2018. New and unusual deep-water Conoidea revised with shell, radula and DNA characters. Ruthenica 28(2): 47-82
Résumé [+] [-]In the course of preparation of a new molecular phylogeny of Conoidea based on exon-capture some new species and species with notable morphology were revealed. The taxonomy of these species is discussed and the radula of most of them illustrated for the first time. New genera are described: Comispira gen. nov. (Cochlespiridae), type species Leucosyrinx mai Li et Li, 2008; Pagodaturris gen. nov. (Clavatulidae), type species Pleurotoma molengraaffi Tesch, 1915. New species described: Comispira compta gen. et sp. nov., Sibogasyrinx sangeri sp. nov. (both Cochlespiridae), Pagodaturris philippinensis gen. et sp. nov. (Clavatulidae), Horaiclavus micans sp. nov., Iwaoa invenusta sp. nov. (both Horaiclavidae), Lucerapex cracens sp. nov., Lucerapex laevicarinatus sp. nov. (Turridae), Heteroturris kanacospira sp. nov. (Borsoniidae). Epideira Hedley, 1918 is reallocated from Pseudomelatomidae to Horaiclavidae. The radulae of Kuroshioturris nipponica (Shuto, 1961) (Turridae), Leucosyrinx verrillii (Dall, 1881), and Leucosyrinx luzonica (Powell, 1969) comb. nov. are illustrated for the first time.
Campagnes accessibles citées (19) [+] [-]AURORA 2007, BIOPAPUA, CEAMARC-AA, CONCALIS, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, INHACA 2011, KARUBENTHOS 2, MADEEP, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, SANTO 2006, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y., Kosyan A., Sorokin P. & Fedosov A. 2020. On the taxonomic position of Phaenomenella Fraussen & Hadorn, 2006 (Neogastropoda, Buccinoidea) with description of two new species. Zoosystema 42(3): 33. DOI:10.5252/zoosystema2020v42a3
Résumé [+] [-]This contribution provides novel information on the anatomy, radula and phylogeny of several species of Phaenomenella Fraussen & Hadorn, 2006, a genus of Buccinoidea Rafinesque, 1815 with unclear affinities. Molecular phylogenetic analysis based on sequences of mitochondrial COI and nuclear 28S rRNA genes of different representatives of Buccinoidea revealed close relationships of Phaenomenella with Siphonalia A. Adams, 1863 both taxa forming a clade with maximal support. The anatomy of two species of the latter genus was examined for the first time for comparative purposes. The subfamily Siphonaliinae Finlay, 1928 was erected for several Recent and fossil genera of Southern Hemisphere Buccinidae Rafinesque, 1815, and is still recognized by current taxonomists (Bouchet et al. 2017). Species of all Recent genera of Siphonaliinae were included in our analysis and the monophyly of the subfamily Siphonaliinae in its original scope is rejected. Molecular and morphological data revealed two still unnamed species of Phaenomenella from the lower bathyal zone of the South China Sea. These species, Phaenomenella nicoi n. sp. and P. samadiae n. sp. are described in the present study.
Campagnes accessibles citées (4) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Fedosov A.E., Kosyan A.R., Puillandre N., Sorokin P.A., Kano Y., Clark R. & Bouchet P. 2022. Molecular phylogeny and revised classification of the Buccinoidea (Neogastropoda). Zoological Journal of the Linnean Society 194(3): 789-857. DOI:10.1093/zoolinnean/zlab031
Résumé [+] [-]Abstract The superfamily Buccinoidea is distributed across the oceans of the world from the Arctic Ocean to the Antarctic and from intertidal to abyssal depths. It encompasses 3351 recent species in 337 genera. The latest taxonomic account recognized eight full families. For the first time, the monophyly of the superfamily and the relationships among the families are tested with molecular data supplemented by anatomical and radula data. Five genetic markers were used: fragments of mitochondrial COI, 16S rRNA, 12S rRNA and nuclear Histone 3 (H3) and 28S rRNA genes (for 225 species of 117 genera). Our analysis recovered Buccinoidea monophyletic in Bayesian analyses. The relationships between the formerly recognized families and subfamilies are drastically revised and a new classification of the superfamily is here proposed, now including 20 taxa of family rank and 23 subfamilies. Five new families (Chauvetiidae, Dolicholatiridae, Eosiphonidae, Prodotiidae and Retimohniidae) and one subfamily of Nassariidae (Tomliniinae) are described. Austrosiphonidae and Tudiclidae are resurrected from synonymy and employed in a new taxonomical extension. All but 40 recent genera are reclassified. Our results demonstrate that anatomy is rather uniform within the superfamily. With exceptions, the rather uniform radular morphology alone does not allow the allocation of genera to a particular family without additional molecular data.
Campagnes accessibles citées (42) [+] [-]ATIMO VATAE, AURORA 2007, BIOPAPUA, BOA1, CEAMARC-AA, CHALCAL 2, CONCALIS, CORSICABENTHOS 1, Restreint, Restreint, DongSha 2014, EBISCO, GUYANE 2014, ILES DU SALUT, INHACA 2011, KANACONO, KARUBENTHOS 2, KARUBENTHOS 2012, KAVALAN 2018, KOUMAC 2.1, KOUMAC 2.3, MADIBENTHOS, MAINBAZA, MIRIKY, MUSORSTOM 4, Restreint, NORFOLK 2, NanHai 2014, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, TAIWAN 2000, TAIWAN 2004, TARASOC, TERRASSES, Tuhaa Pae 2013, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Puillandre N., Fraussen K., Fedosov A. & Bouchet P. 2013. Deep-water Buccinidae (Gastropoda: Neogastropoda) from sunken wood, vents and seeps: molecular phylogeny and taxonomy. Journal of the Marine Biological Association of the United Kingdom 93(08): 2177-2195. DOI:10.1017/S0025315413000672
Résumé [+] [-]Buccinidae—like other canivorous and predatory molluscs—are generally considered to be occasional visitors or rare colonizers in deep-sea biogenic habitats. However, casual observations during tropical deep-sea cruises suggest that associations between buccinids and sunken wood, in particular, are not fortuitous. Enigmatocolus monnieri has been found to co-occur in Madagascar with bathymodiolines, vesicomyids and solemyids, indicating the presence of seeps, and species of Thermosipho gen. Nov. Have been sampled by submersibles and remotely operated vehicles, exclusively from hydrothermal vents. A molecular phylogeny (based on CO1, 12S and 28S genes) reveals that buccinid genera potentially associated with sunken wood (Eosipho, Gaillea gen. Nov., Calagrassor gen. Nov., and Manaria) are closely related to taxa from vents (Thermosipho gen. Nov.) and seeps (Enigmaticolus). The anatomy of several dissected species did not reveal any special trait that could be interpreted as a special adaptation to biogenic substrates. Buccinids from sunken wood are most diverse in the Indo-Pacific centre of marine biodiversity, the ‘Coral Triangle’, at depths between 100 and 1000 m, with numerous species still undescribed.
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Fedosov A.E., Puillandre N. & Bouchet P. 2016. Integrative taxonomy approach to Indo-Pacific Olividae: new species revealed by molecular and morphological data. Ruthenica 26(2): 123-143
Résumé [+] [-]Five new species of Olivoidea are described based on molecular and morphological evidence: four shallow subtidal Ancilla from Madagascar and Papua New Guinea, and one deep water (500-600 m) Calyptoliva from the Tuamotus. The sympatric – but not syntopic - Ancilla morrisoni and A. kaviengensis, from New Ireland province, are morphologically cryptic, differing mostly in shell colour, but are molecularly distinct. The sympatric – and possibly syntopic – Ancilla atimovatae and A. lhaumeti, belong to a species flock from southernmost Madagascar; A. atimovatae is conchologically nearly indistinguishable from A. ventricosa, but differs markedly in radular morphology. Calyptoliva was previously known only from the Coral Sea; C. bbugae is the first representative of the genus to yield molecular data. The new Ancilla are described based on sequenced holotypes; the type material of the new Calyptoliva includes a sequenced paratype.
Campagnes accessibles citées (9) [+] [-]
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Fedosov A.E., Snyder M.A. & Bouchet P. 2018. Pseudolatirus Bellardi, 1884 revisited, with the description of two new genera and five new species (Neogastropoda: Fasciolariidae). European Journal of Taxonomy 433: 1-57. DOI:10.5852/ejt.2018.433
Résumé [+] [-]The genus Pseudolatirus Bellardi, 1884, with the Miocene type species Fusus bilineatus Hörnes, 1853, has been used for 13 Miocene to Early Pleistocene fossil species and eight Recent species and has traditionally been placed in the fasciolariid subfamily Peristerniinae Tryon, 1880. Although the fossil species are apparently peristerniines, the Recent species were in their majority suspected to be most closely related to Granulifusus Kuroda & Habe, 1954 in the subfamily Fusininae Wrigley, 1927. Their close affinity was confirmed by the molecular phylogenetic analysis of Couto et al. (2016). In the molecular phylogenetic section we present a more detailed analysis of the relationships of 10 Recent Pseudolatirus-like species, erect two new fusinine genera, Okutanius gen. nov. (type species Fusolatirus kuroseanus Okutani, 1975) and Vermeijius gen. nov. (type species Pseudolatirus pallidus Kuroda & Habe, 1961). Five species are described as new for science, three of them are based on sequenced specimens (Granulifusus annae sp. nov., G. norfolkensis sp. nov., Okutanius ellenae gen. et sp. nov.) and two (G. tatianae sp. nov., G. guidoi sp. nov.) are attributed to Granulifusus on the basis of conchological similarities to sequenced species. New data on radular morphology is presented for examined species.
Campagnes accessibles citées (60) [+] [-]ATIMO VATAE, AURORA 2007, BATHUS 1, BATHUS 2, BATHUS 3, BATHUS 4, BERYX 11, BIOCAL, BIOGEOCAL, BORDAU 1, BORDAU 2, CHALCAL 2, CONCALIS, Restreint, DongSha 2014, EBISCO, EXBODI, GEMINI, GUYANE 2014, HALICAL 1, HALIPRO 1, KANACONO, KARUBAR, KARUBENTHOS 2012, KAVIENG 2014, LAGON, LIFOU 2000, LITHIST, MADEEP, MD32 (REUNION), MIRIKY, MUSORSTOM 10, MUSORSTOM 2, MUSORSTOM 3, MUSORSTOM 4, MUSORSTOM 5, MUSORSTOM 6, MUSORSTOM 7, MUSORSTOM 8, NORFOLK 1, NanHai 2014, PAKAIHI I TE MOANA, PANGLAO 2004, PANGLAO 2005, PAPUA NIUGINI, SALOMON 1, SALOMON 2, SANTO 2006, SMIB 2, SMIB 3, SMIB 4, SMIB 5, SMIB 6, SMIB 8, TAIWAN 2000, TARASOC, TERRASSES, VAUBAN 1978-1979, VOLSMAR, Restreint
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Kosyan A., Sorokin P., Herbert D.G. & Fedosov A. 2020. Review of the abysso-hadal genus Bayerius (Gastropoda: Neogastropoda: Buccinidae) from the North-West Pacific, with description of two new species. Deep Sea Research Part I: Oceanographic Research Papers 160: 103256. DOI:10.1016/j.dsr.2020.103256
Résumé [+] [-]The abyssal and hadal Buccinoidea from the north-western Pacific formerly attributed to the genera Tacita and Calliloncha were analyzed for the first time using both multilocus molecular and morphological data. The results allow re-evaluation of the inter- and intrageneric variability of morphological characters and demonstrate that Tacita, Calliloncha and Paracalliloncha are synonyms of Bayerius, a genus widely distributed in the Pacific Ocean. In our reconstructed phylogeny the genus forms a maximally supported clade with Pararetifusus tenuis and Turrisipho dalli. At present, Bayerius includes 10 species, two of which are described herein as new to science, B. inflatus sp. nov. and B. nekrasovorum sp. nov. with one additional undescribed species represented in our material by a single specimen. The genus is reviewed, with the addition of new data on anatomy and distribution, based on newly obtained material. B. peruvianus is synonymized with B. zenkewitchi. Calliloncha nankaiensis together with Costaria crosnieri are attributed to a new genus, Warenius gen. nov., which clusters with several genera of Buccinoidea from biogenic substrata.
Campagnes accessibles citées (9) [+] [-]ATIMO VATAE, AURORA 2007, KARUBENTHOS 2012, MIRIKY, PANGLAO 2005, PAPUA NIUGINI, SALOMON 2, TAIWAN 2004, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kantor Y.I., Castelin M., Fedosov A. & Bouchet P. 2020. The Indo-Pacific Amalda (Neogastropoda, Olivoidea, Ancillariidae) revisited with molecular data, with special emphasis on New Caledonia. European Journal of Taxonomy 706: 1-52. DOI:10.5852/ejt.2020.706
Résumé [+] [-]In the ancillariid genus Amalda, the shell is character rich and 96 described species are currently treated as valid. Based on shell morphology, several subspecies have been recognized within Amalda hilgendorfi, with a combined range extending at depths of 150–750 m from Japan to the South-West Pacific. A molecular analysis of 78 specimens from throughout this range shows both a weak geographical structuring and evidence of gene flow at the regional scale. We conclude that recognition of subspecies (richeri Kilburn & Bouchet, 1988, herlaari van Pel, 1989, and vezzaroi Cossignani, 2015) within A. hilgendorfi is not justified. By contrast, hilgendorfi-like specimens from the Mozambique Channel and New Caledonia are molecularly segregated, and so are here described as new, as Amalda miriky sp. nov. and A. cacao sp. nov., respectively. The New Caledonia Amalda montrouzieri complex is shown to include at least three molecularly separable species, including A. allaryi and A. alabaster sp. nov. Molecular data also confirm the validity of the New Caledonia endemics Amalda aureomarginata, A. fuscolingua, A. bellonarum, and A. coriolis. The existence of narrow range endemics suggests that the species limits of Amalda with broad distributions, extending, e.g., from Japan to Taiwan (A. hinomotoensis) or even Indonesia, the Strait of Malacca, Vietnam and the China Sea (A. mamillata) should be taken with caution.
Campagnes accessibles citées (41) [+] [-]ATIMO VATAE, BATHUS 1, BATHUS 2, BATHUS 3, BIOCAL, BIOPAPUA, CHALCAL 1, CONCALIS, EBISCO, EXBODI, HALIPRO 1, INHACA 2011, KANACONO, KANADEEP, KARUBENTHOS 2012, KAVIENG 2014, LAGON, MADEEP, MAINBAZA, MIRIKY, MUSORSTOM 4, MUSORSTOM 5, NORFOLK 1, NORFOLK 2, NanHai 2014, PANGLAO 2005, PAPUA NIUGINI, Restreint, SALOMON 2, SALOMONBOA 3, SANTO 2006, SMIB 1, SMIB 2, SMIB 3, SMIB 4, SMIB 5, SMIB 8, TERRASSES, VAUBAN 1978-1979, Restreint, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Kilburn R.N., Fedosov A.E. & Kantor Y.I. 2014. The shallow-water New Caledonia Drilliidae of genus Clavus Montfort, 1810 (Mollusca: Gastropoda: Conoidea). Zootaxa 3818(1): 1-69. DOI:10.11646/zootaxa.3818.1.1
Résumé [+] [-]Species of the genus Clavus of the conoidean family Drilliidae that occur in the littoral and shallow waters of New Caledonia are here revised. This study is based primarily on recent expedition material from the Institut de Recherche pour le Développement (New Caledonia) and Muséum National d’Histoire Naturelle (France). A total of 22 species is recorded, of which eight are described as new. New species: Clavus boucheti, Clavus delphineae, Clavus virginieae, Clavus picoides, Clavus squamiferus, Clavus devexistriatus, Clavus hylikos, Clavus maestratii; New synonyms: Tylotiella Habe, 1958 = Clavus; Clavus leforestieri Hervier, 1896 = Pleurotoma obliquicostata Reeve, 1845; Pleurotoma mariei Crosse, 1869 = Pleurotoma lamberti Montrouzier, 1860; Clavus mighelsi Kay, 1979, new name for Pleurotoma acuminata Mighels, 1845, non J. Sowerby, 1816, was misidentified by Kay 1979; the lectotype of P. acuminata Mighels, 1845, is mangeliine. Clavus mighelsi sensu Kay 1979, is a synonym of Pleurotoma humilis E. A. Smith, 1879. It is suggested that Pleurotoma pulchella Reeve, 1845, sometimes treated as an Indo-Pacific species, may be a senior synonym of Fenimorea halidorema Schwengel, 1940, from the tropical western Atlantic. Nomen dubium: Pleurotoma mediocris Deshayes, 1863.
Campagnes accessibles citées (10) [+] [-]CHALCAL 1, CORAIL 2, LAGON, MONTROUZIER, MUSORSTOM 5, MUSORSTOM 6, PALEO-SURPRISE, PANGLAO 2004, Restreint, SANTO 2006
Codes des collections associés: IM (Mollusques) -
Modica M.V., Gorson J., Fedosov A.E., Malcolm G., Terryn Y., Puillandre N. & Holford M. 2020. Macroevolutionary Analyses Suggest That Environmental Factors, Not Venom Apparatus, Play Key Role in Terebridae Marine Snail Diversification, in Serb J.(Ed.), Systematic Biology 69(3): 413-430. DOI:10.1093/sysbio/syz059
Résumé [+] [-]Abstract How species diversification occurs remains an unanswered question in predatory marine invertebrates, such as sea snails of the family Terebridae. However, the anatomical disparity found throughput the Terebridae provides a unique perspective for investigating diversification patterns in venomous predators. In this study, a new dated molecular phylogeny of the Terebridae is used as a framework for investigating diversification of the family through time, and for testing the putative role of intrinsic and extrinsic traits, such as shell size, larval ecology, bathymetric distribution, and anatomical features of the venom apparatus, as drivers of terebrid species diversification. Macroevolutionary analysis revealed that when diversification rates do not vary across Terebridae clades, the whole family has been increasing its global diversification rate since 25 Ma. We recovered evidence for a concurrent increase in diversification of depth ranges, while shell size appeared to have undergone a fast divergence early in terebrid evolutionary history. Our data also confirm that planktotrophy is the ancestral larval ecology in terebrids, and evolutionary modeling highlighted that shell size is linked to larval ecology of the Terebridae, with species with long-living pelagic larvae tending to be larger and have a broader size range than lecithotrophic species. Although we recovered patterns of size and depth trait diversification through time and across clades, the presence or absence of a venom gland (VG) did not appear to have impacted Terebridae diversification. Terebrids have lost their venom apparatus several times and we confirm that the loss of a VG happened in phylogenetically clustered terminal taxa and that reversal is extremely unlikely. Our findings suggest that environmental factors, and not venom, have had more influence on terebrid evolution.
Campagnes accessibles citées (14) [+] [-]ATIMO VATAE, EXBODI, INHACA 2011, KARUBENTHOS 2, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, NanHai 2014, PANGLAO 2005, SALOMON 2, SANTO 2006, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques) -
Puillandre N., Fedosov A.E., Zaharias P., Aznar-cormano L. & Kantor Y.I. 2017. A quest for the lost types of Lophiotoma (Gastropoda: Conoidea: Turridae): integrative taxonomy in a nomenclatural mess. Zoological Journal of the Linnean Society 181(2): 243-271. DOI:10.1093/zoolinnean/zlx012
Campagnes accessibles citées (6) [+] [-]
Codes des collections associés: IM (Mollusques) -
Zaharias P., Pante E., Gey D., Fedosov A.E. & Puillandre N. 2020. Data, time and money: evaluating the best compromise for inferring molecular phylogenies of non-model animal taxa. Molecular Phylogenetics and Evolution 142: 106660. DOI:10.1016/j.ympev.2019.106660
Résumé [+] [-]For over a decade now, High Throughput sequencing (HTS) approaches have revolutionized phylogenetics, both in terms of data production and methodology. While transcriptomes and (reduced) genomes are increasingly used, generating and analyzing HTS datasets remain expensive, time consuming and complex for most nonmodel taxa. Indeed, a literature survey revealed that 74% of the molecular phylogenetics trees published in 2018 are based on data obtained through Sanger sequencing. In this context, our goal was to identify the strategy that would represent the best compromise among costs, time and robustness of the resulting tree. We sequenced and assembled 32 transcriptomes of the marine mollusk family Turridae, considered as a typical non-model animal taxon. From these data, we extracted the loci most commonly used in gastropod phylogenies (cox1, 12S, 16S, 28S, h3 and 18S), full mitogenomes, and a reduced nuclear transcriptome representation. With each dataset, we reconstructed phylogenies and compared their robustness and accuracy. We discuss the impact of missing data and the use of statistical tests, tree metrics, and supertree and supermatrix methods to further improve phylogenetic data acquisition pipelines. We evaluated the overall costs (time and money) in order to identify the best compromise for phylogenetic data sampling in non-model animal taxa. Although sequencing full mitogenomes seems to constitute the best compromise both in terms of costs and node support, they are known to induce biases in phylogenetic reconstructions. Rather, we recommend to systematically include loci commonly used for phylogenetics and taxonomy (i.e. DNA barcodes, rRNA genes, full mitogenomes, etc.) among the other loci when designing baits for capture.
Campagnes accessibles citées (2) [+] [-]
Codes des collections associés: IM (Mollusques) -
Zaharias P., Kantor Y.I., Fedosov A.E., Criscione F., Hallan A., Kano Y., Bardin J. & Puillandre N. 2020. Just the once will not hurt: DNA suggests species lumping over two oceans in deep-sea snails (Cryptogemma). Zoological Journal of the Linnean Society 190(2): 532-557. DOI:10.1093/zoolinnean/zlaa010
Résumé [+] [-]Abstract The practice of species delimitation using molecular data commonly leads to the revealing of species complexes and an increase in the number of delimited species. In a few instances, however, DNA-based taxonomy has led to lumping together of previously described species. Here, we delimit species in the genus Cryptogemma (Gastropoda: Conoidea: Turridae), a group of deep-sea snails with a wide geographical distribution, primarily by using the mitochondrial COI gene. Three approaches of species delimitation (ABGD, mPTP and GMYC) were applied to define species partitions. All approaches resulted in eight species. According to previous taxonomic studies and shell morphology, 23 available names potentially apply to the eight Cryptogemma species that were recognized herein. Shell morphometrics, radular characters and geographical and bathymetric distributions were used to link type specimens to these delimited species. In all, 23 of these available names are here attributed to seven species, resulting in 16 synonymizations, and one species is described as new: Cryptogemma powelli sp. nov. We discuss the possible reasons underlying the apparent overdescription of species within Cryptogemma, which is shown here to constitute a rare case of DNA-based species lumping in the hyper-diversified superfamily Conoidea.
Campagnes accessibles citées (25) [+] [-]ATIMO VATAE, AURORA 2007, BIOMAGLO, BIOPAPUA, CONCALIS, DongSha 2014, EBISCO, EXBODI, GUYANE 2014, KANACONO, KANADEEP, KAVIENG 2014, MADEEP, MAINBAZA, MIRIKY, NORFOLK 2, NanHai 2014, PANGLAO 2004, PAPUA NIUGINI, SALOMON 2, SALOMONBOA 3, TAIWAN 2013, TARASOC, TERRASSES, ZhongSha 2015
Codes des collections associés: IM (Mollusques)